Paraburkholderia dioscoreae: PDMSB3_3895
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Entry
PDMSB3_3895 CDS
T08115
Symbol
murE
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate:meso-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
pdio
Paraburkholderia dioscoreae
Pathway
pdio00300
Lysine biosynthesis
pdio00550
Peptidoglycan biosynthesis
pdio01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pdio00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
PDMSB3_3895 (murE)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
PDMSB3_3895 (murE)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pdio01011
]
PDMSB3_3895 (murE)
Enzymes [BR:
pdio01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
PDMSB3_3895 (murE)
Peptidoglycan biosynthesis and degradation proteins [BR:
pdio01011
]
Precursor biosynthesis
Amino acid ligase
PDMSB3_3895 (murE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Motif
Other DBs
NCBI-ProteinID:
VVD30351
UniProt:
A0A5Q4ZD31
LinkDB
All DBs
Position
I:complement(3994554..3996110)
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AA seq
518 aa
AA seq
DB search
MSALRHKHPAQRQIADALTWLHAHVQPGAHLHADTRSLAAGDVFFAYAVDGADNHPFIEG
AIERGAAAVLVQPEGFSGAIDPSNTLAVPALNELAGSIASGWYNDPSDSMLTVGITGTNG
KTSCSQWISAALTALGTRCAIIGTLGTGLPGHLVHTGFTTPDAPQLQRSLAQLRDAGAQA
VAMEVSSHALHQGRVNGTAFDIAVFTNLTQDHLDYHQTFEAYEAAKARLFAWPELRAAVI
NRDDAAGRRLLASTQGHARTIAYGLDSEQGALQDAPRADALLLASNVRATATGTAFHLST
SEWGDAEVEVQTLGAFNVSNLLGVLGALLAADVPFEAALAELAKLEPVNGRMQRLGGRLQ
NDEPLVVIDYAHTPDALEKTLEALRPMAAARGGELICMFGCGGDRDATKRPLMGAIAEKI
ADGVVLTSDNPRSEDPQSIIEQIAAGMKDASKARRIEDRASAILQAIRSAAREDVIVLAG
KGHEATQEIMGKKRAFSDQDHARLALAARATQARGGGE
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcgctgcgtcacaagcatcccgcgcagcggcagatcgccgacgctctaacctgg
ctgcacgctcacgtgcagccaggcgcgcatctgcacgcagacacgcgctcgctcgcggcc
ggcgacgtgtttttcgcctacgcagtggacggcgcggacaaccatccgttcatcgagggt
gcgatcgaacgtggcgccgccgccgtgctggttcagcccgagggcttcagcggcgcgatc
gatccgtcgaacacgctcgccgtgccggcgttgaacgaactcgcgggttcgatcgcgagc
ggctggtacaacgacccaagcgacagcatgctgacggtcggcattaccggcacgaacggc
aagacttcgtgcagccagtggatctcggcggcgctgacggcgctcggcacgcgttgcgcg
atcatcggcacgctcggcacgggtttgcccggtcacctggtgcacacgggtttcaccacg
cccgacgcaccgcaactgcaacgcagcctcgcgcaattgcgcgacgcgggcgcgcaggcg
gtcgccatggaagtgtcgtcgcacgcgctgcaccaggggcgcgtgaacggcacggcgttc
gacatcgccgtgttcacgaatctcacgcaggaccatctcgactatcaccagacgttcgaa
gcctacgaagccgccaaagcgcgcctcttcgcctggcccgaactgcgtgcggccgtgatc
aatcgcgacgatgcagccggccgccgtttgctcgccagcacgcaaggccatgcgcgcacg
attgcctacggcctcgacagcgaacaaggcgcgctgcaggacgcgccgcgagctgacgcg
ttgctgctggcctcgaatgtgcgcgccacggccacgggcaccgcgttccatctgagcacc
tcggagtggggcgatgccgaagtcgaagtgcaaacgctcggcgcgttcaacgtgagcaat
ctgctcggcgtactgggcgcgttgcttgccgccgacgtgccgttcgaagccgcgctggcc
gaactggcgaagctcgaaccggtgaacggccgcatgcagcgtctgggcggccgcttgcag
aacgacgaaccgctcgtcgtgatcgattacgcgcacacgccggatgcgctggaaaagacg
ctggaggcgctgcgcccgatggccgccgcacgcggtggcgaactgatctgcatgttcggc
tgcggcggcgatcgcgatgcgaccaagcgtccgctgatgggcgcgatcgccgagaagatc
gccgacggcgtcgtgctgaccagcgacaacccgcgcagcgaagatccgcaatcgatcatc
gagcagatcgcggcgggtatgaaagacgcgtcgaaggcacgccgtatcgaggaccgcgca
agcgcgatcctgcaggcgatccgcagcgccgcgcgcgaagacgttatcgtgctggccggc
aaggggcatgaagcaacacaggaaatcatgggtaagaaacgcgctttctccgatcaggat
cacgctcgcctcgcgctggccgcgcgcgcgacgcaggcacgcggaggtggcgaatga
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