Candidatus Pantoea soli: D8B20_03270
Help
Entry
D8B20_03270 CDS
T06714
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
pdis
Candidatus Pantoea soli
Pathway
pdis00300
Lysine biosynthesis
pdis00550
Peptidoglycan biosynthesis
pdis01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pdis00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
D8B20_03270
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
D8B20_03270
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pdis01011
]
D8B20_03270
Enzymes [BR:
pdis01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
D8B20_03270
Peptidoglycan biosynthesis and degradation proteins [BR:
pdis01011
]
Precursor biosynthesis
Amino acid ligase
D8B20_03270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Motif
Other DBs
NCBI-ProteinID:
QDY40974
UniProt:
A0A518X9W5
LinkDB
All DBs
Position
721902..723389
Genome browser
AA seq
495 aa
AA seq
DB search
MTDRNLRDLLAPWVPGAPARPLRDMTLDSRSAAAGDLFIAVAGHHADGRRFIPQAIAQGV
AAVIAEAEGEASDGDIREMHGVPVIYLAQLPQRLSALAGRFYQQPADKLKLIGVTGTNGK
TTTTQLIAQWASLLGETSAVMGTVGNGLYGQLVPSDNTTGSAVDVQHLLHDLAGQGATLA
AMEVSSHGLVQHRVAALPFAAAVFTNLSRDHLDYHGDMQGYESAKWLLFSEHQVAESIIN
ADDEVGRRWLQQLPDAVAVTLADNLQAGCHGRWLKATAVNYHDGGAHVQFSSSWGEGEFD
SRLMGAFNVSNLLLALATLLALDYPLAALMATAGQLQPVCGRMEVFSAPGKPTVVVDYAH
TPDALEKALEAARLHCKGKLWCLFGCGGDRDKGKRPLMGAIAEQFADIVVITDDNPRSED
PAAIVNDILTGLLDPGRARVVAGRAQAVTHAVMQAQADDIVLVAGKGHEDYQIIGNRRLD
YSDRDTVARLLGVMA
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
gtgacagatcgtaacctgcgcgacttactggccccgtgggtgcctggcgcgccggcgcgt
ccactccgtgacatgacactggacagccgctctgcggctgccggcgatctgtttatcgcc
gtggcgggccatcatgctgatggacgtcgtttcattccgcaggctatcgctcagggcgtg
gcggcagtgattgccgaagctgaaggcgaagccagcgatggggatatccgtgaaatgcac
ggtgttccggttatctatctggcgcagttgccgcagcgcctttcggcgctggccgggcgc
ttttatcagcagcccgcagacaaactgaaactgattggtgtcactggcaccaacggcaaa
accaccaccacgcagctgattgcgcagtgggccagcctgctgggagaaaccagcgcggtg
atgggcacggtgggcaatgggttatatggacagctggtgccgagtgataacaccaccggc
tcggcggtcgacgtacagcacctgctgcatgatttggccggacagggcgcaaccctggcg
gcaatggaagtctcttcacatggtctggtccagcaccgcgtggcggccctgccgtttgct
gcggcggtatttaccaatctgagccgcgatcacctcgactatcacggtgatatgcagggc
tatgaatccgctaaatggctgctgttctcggagcatcaggtcgctgaatccattattaac
gccgacgacgaagtcggacgccgctggctgcagcagctgccggatgcggtggcggtcacc
ctggcggacaacctgcaggcgggctgtcacgggcgctggctgaaggccaccgcggtgaac
tatcacgatggcggtgcgcatgtgcagttcagctccagctggggagaaggggagtttgac
agccggctgatgggcgcgtttaacgtcagcaatctgctgctggcgctggcgaccctgctg
gcgctggattatccgctggcggcgctgatggcgacggcaggtcagctgcagcctgtctgc
ggacgcatggaggtgttcagcgcaccgggcaagccaaccgtggtggtggattatgcccac
acgccagatgcgctggaaaaagcgctggaagcggcgcgtttgcactgtaaaggcaagctg
tggtgcctgttcggttgcggcggcgatcgcgacaaaggcaagcgaccgctgatgggcgcc
attgccgaacagtttgcggacatcgttgtgattactgacgacaacccacgcagcgaagat
ccggcggcgatcgttaatgacattctgaccggcctgctggatccgggccgcgcgcgcgtg
gtcgcagggcgcgcgcaggcagtgacgcatgcggtaatgcaggcgcaggccgatgacatc
gtgctggtggccggcaaaggccatgaagattatcagatcattggcaaccgtcgtcttgac
tactccgatcgcgacaccgtcgcccgtttactgggggtgatggcatga
DBGET
integrated database retrieval system
