Candidatus Pantoea soli: D8B20_04720
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Entry
D8B20_04720 CDS
T06714
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
pdis
Candidatus Pantoea soli
Pathway
pdis01501
beta-Lactam resistance
pdis01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
pdis00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
D8B20_04720
01503 Cationic antimicrobial peptide (CAMP) resistance
D8B20_04720
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pdis03036
]
D8B20_04720
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pdis02000
]
D8B20_04720
01504 Antimicrobial resistance genes [BR:
pdis01504
]
D8B20_04720
Chromosome and associated proteins [BR:
pdis03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
D8B20_04720
Transporters [BR:
pdis02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
D8B20_04720
Antimicrobial resistance genes [BR:
pdis01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
D8B20_04720
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CusB_dom_1
HlyD_D23
HlyD_3
Biotin_lipoyl_2
Motif
Other DBs
NCBI-ProteinID:
QDY41243
UniProt:
A0A518XAL5
LinkDB
All DBs
Position
complement(1033796..1034986)
Genome browser
AA seq
396 aa
AA seq
DB search
MNKNRGLAPLAAAVMLSGSFLLTGCDDNKSQQAAQQQPPEVGVVTLKKEPLKITTELPGR
TSAFRVAEVRPQVSGIILKRNFVEGTDVKAGVSLYQIDPATYQAAYDSAKGDLAQAQANA
RVAQLTLKRYKPLLGTKYISQQDYDNAAATAAQTAAAVQAAQANVETARINLAYTKVTSP
ISGRIGKSAVTEGALVSSGQTTALATVQQLDPMYVDVTQSSDDFLRLRAELESGQLKQND
GKANVTLLMQNGNAYSQQGTLEFSDVTVDETTGSITLRAIFPNPDHRLLPGMFVRARLDE
GTNPSALLVPQQGVTRTPTGEASAMVVGADNKVEVRKITANQAFGDKWLVTQGLKEGDRV
ITVGIQRAKPGAQVTPQEVKDDANALPESPSAKSSS
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atgaataaaaacagaggattagcgcctctggcggccgccgtgatgctctcaggcagcttt
ttgttaacaggatgtgatgataataaatcccagcaagccgcccagcagcaaccgcctgaa
gtgggcgttgtgacgttaaaaaaagagcccctgaaaatcacgaccgaactgcctggccgt
acctcggcgttccgcgtagccgaagtgcgtccgcaggtgtcgggtatcattctgaagcgt
aattttgttgaaggcacagacgtcaaagccggcgtgtcgctctatcagatcgatccggcg
acgtatcaggctgcctatgacagcgccaaaggcgacctggcgcaggcgcaggcaaacgcc
cgtgtggcgcagctgaccctgaaacgttataagccgctgctgggcaccaaatacatcagc
cagcaggattatgacaacgctgccgccaccgctgcgcagaccgcggcggccgtacaggct
gctcaggccaacgtcgagaccgcgcgcatcaatctggcttacaccaaagtcacttcgcca
attagcggccgtattggcaaatccgctgtcacggaaggcgcgctggtgtccagtggccag
acgaccgcgctggctaccgtacagcagcttgacccgatgtatgtggatgtgacccagtcc
agcgacgatttcctgcgtttgcgcgcggagctggaatccggtcagctgaagcaaaatgac
ggtaaagccaatgtcaccctgctgatgcaaaacggtaacgcctatagccagcaaggcaca
ttggaattttccgatgtcaccgtggatgaaaccaccggctccattacgctgcgcgcgatt
ttcccgaacccggatcaccgcctgctgccaggaatgttcgtgcgggcgcgtctggatgag
ggcaccaatccttctgccctgctggtgccgcaacagggtgtgacccgcacgccgaccggc
gaagccagtgccatggtggtgggtgccgacaacaaagtggaagtgcgcaagattaccgcg
aatcaggcctttggcgacaagtggctggtcacgcagggcctgaaagagggcgatcgcgtg
attactgtgggtattcagcgtgccaaaccgggtgcacaggtaacgccacaggaagtcaaa
gacgatgccaatgcgctaccggaatcaccgtctgctaaatcatcgtcataa
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