Pampinifervens diazotrophicum: IAE16_02375
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Entry
IAE16_02375 CDS
T11281
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
pdiz Pampinifervens diazotrophicum
Pathway
pdiz01501
beta-Lactam resistance
pdiz01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
pdiz00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
IAE16_02375
01503 Cationic antimicrobial peptide (CAMP) resistance
IAE16_02375
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pdiz03036
]
IAE16_02375
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pdiz02000
]
IAE16_02375
01504 Antimicrobial resistance genes [BR:
pdiz01504
]
IAE16_02375
Chromosome and associated proteins [BR:
pdiz03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
IAE16_02375
Transporters [BR:
pdiz02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
IAE16_02375
Antimicrobial resistance genes [BR:
pdiz01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
IAE16_02375
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BSH_RND
YknX_C
Beta-barrel_RND_2
HH_MFP_RND
BSH_CzcB
Beta-barrel_RND
HH_YBHG
HH_EMRA
CzcB_C
BSH_YknX
ARM_SRB8
HH_AAEA_pHBA
Hanta_nucleocap
LEKR1
Motif
Other DBs
NCBI-ProteinID:
WPM32533
LinkDB
All DBs
Position
complement(394331..395395)
Genome browser
AA seq
354 aa
AA seq
DB search
MRKVLYAIGIFALLFALSCQRQAQKASEQQPRERRVVVSLYKLKSEEVPIEYATKGYFEG
EKDVLLRPLVSGRVLSLFVEEGAFVKSGEALLKIDPADYENVLGQLEAQLAQAKASYENL
KSVYERRKFLLERELIAREEFENVQTQLKAQEELIRSIQAQIANARLNLSRTSLTAPFSG
YIAQRFVNVGDYITPQSQTFRLVTLDPIRFVFQTPQEYLPYAKEGSKVKIRVEAFGEYEG
TVFFVSPTADANRLITIKARLKNPKGDLKPNMYGEARLSLGVEKGFAVPEQAVVVQGNKR
VVWKIQDGTAQPVQVEVIKQGKGIVYIKGELQEGDSIALENAYVLQQGVKVEVR
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atgaggaaggttctttatgccataggcatttttgctctactctttgccctttcctgtcag
aggcaagctcaaaaggcttcagaacaacagccaagagagagaagggtagtggtgagcctc
tataaattgaagtccgaagaagtgccaatagagtatgctacaaagggctactttgaggga
gaaaaggatgttttgcttagacctcttgtcagcggtagagttttgagcctttttgtggaa
gagggtgcattcgtaaagagcggagaggctctcttgaagatagaccctgcggactatgaa
aatgtgctcggacagttagaggcacagcttgcacaagcaaaggcaagctatgaaaactta
aagtccgtctatgaaaggagaaaatttctccttgaaagagagcttattgcaagagaagag
tttgaaaacgtccagacacagctcaaggctcaagaagagctaattagaagcattcaagca
cagatagccaacgcaaggctaaacttgagcaggacaagcctcacagcacccttctctgga
tacatagcccaaaggtttgtaaacgtgggagactacataacacctcaaagtcagaccttt
agacttgtgacccttgaccctataaggtttgtttttcaaactcctcaagaatatcttcca
tacgcaaaggagggttcaaaggttaagataagggttgaagcctttggagaatacgaaggg
acagtgttttttgtttcacccactgcggatgccaataggcttataaccataaaagcaagg
ctaaaaaaccctaagggagacctaaagccaaacatgtatggagaagcaaggctctcgctc
ggagttgaaaagggttttgcagtgccagagcaggcggtggtagttcaaggaaacaagagg
gtggtttggaaaattcaggatggcacagcccagcctgtgcaagtggaggttataaaacaa
ggaaaaggcatagtttacataaagggtgagctacaagagggtgatagcatagccttagaa
aatgcctacgtgcttcaacaaggcgtaaaggtggaggtaagatga
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