Pampinifervens diazotrophicum: IAE16_05055
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Entry
IAE16_05055 CDS
T11281
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
pdiz Pampinifervens diazotrophicum
Pathway
pdiz00300
Lysine biosynthesis
pdiz00550
Peptidoglycan biosynthesis
pdiz01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pdiz00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
IAE16_05055
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
IAE16_05055
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pdiz01011
]
IAE16_05055
Enzymes [BR:
pdiz01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
IAE16_05055
Peptidoglycan biosynthesis and degradation proteins [BR:
pdiz01011
]
Precursor biosynthesis
Amino acid ligase
IAE16_05055
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
DUF1611
Motif
Other DBs
NCBI-ProteinID:
WPM31196
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Position
complement(867714..869105)
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AA seq
463 aa
AA seq
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MNLKEILSYAKGISSNSKEVREGYVFVAIKGTQVDGHDFVEEALQRGALYVFVEREVGIK
DPRIIKVEDTRKALGELASLFYGEVSKRLKIVGITGTNGKTTTTHIIESILNKAGIKTGL
MGTIYYRLGEKIYEYEGRTTPDPIKWHSTLKAMWEEGASAVVCEVSSHALDQKRIWGTDF
YMVGFTNLSQDHLDYHGTMEDYFLAKARLFEEYAYTYAVINEDDPYGKRLKAIAKNPRTY
GREGDFKILDFQTDFEGSRLRVAYEGKVYDFFSNLRGNFQAYNLSLGILVGFLWGLESQA
IQEGIRQVQVPGRFETYKGKGFVVIIDYAHTPDALEKVLRTARALCKNRLIVVFGAGGNR
DRTKRPLMGKTAEAIADLIVLTSDNPRFEEPMAIIEDILSGIENKGKVLVEQDRRKAIEL
AISMAQEGDVILIAGKGHEDYQEIKGVKYPFKDSEVVKEVLGV
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgaacctaaaagaaatcctctcttatgcaaaaggtataagttctaactccaaggaagtc
cgcgagggttatgtttttgtagccattaaaggaacgcaggtggatgggcatgactttgtg
gaagaggctttgcaaaggggtgctctctacgtgtttgtggagagggaagtaggcataaaa
gacccacgcattataaaggtggaagatacaagaaaggctcttggtgagctggcaagtctt
ttttatggtgaggtttcaaagaggcttaagatagtgggcataacggggacaaatggcaag
actaccacaacgcacataatagagtctatcctcaacaaggcgggtataaaaactggtctt
atggggacgatttactacaggcttggagagaagatatacgaatacgaagggaggaccact
ccagaccctataaagtggcactccacactaaaagccatgtgggaagagggtgcaagtgcg
gtggtttgcgaggtttcctctcatgcacttgaccaaaagaggatatggggcacggacttt
tatatggtgggctttaccaacctcagccaagaccatcttgactatcatggcactatggaa
gactacttccttgcaaaggcaaggctctttgaggagtatgcatatacctatgcggtgata
aatgaggatgacccatatggcaaaaggctaaaggctattgcaaaaaacccaagaacctac
ggaagggaaggagactttaaaattcttgactttcaaacagactttgagggctcaaggcta
agagtggcatacgaaggaaaggtgtatgactttttctccaacctgcgagggaactttcag
gcgtataacctctctcttggtatacttgtgggctttctgtgggggcttgaaagccaagct
atacaagaaggcataaggcaggtgcaagtccccggtaggtttgaaacctacaagggaaag
ggctttgtggtgataatagactatgctcatacgcctgatgctttggaaaaggtcttgagg
accgcaagggctctttgcaaaaacaggcttatagtggtctttggtgctgggggaaacagg
gatagaacaaagagacctcttatgggaaagaccgcagaggctattgcagaccttatagtc
ctgacctcggacaacccaaggtttgaagagccgatggctataattgaggatatcttgagt
ggaatagaaaacaaaggaaaggtcttggtggaacaggacagaagaaaggcaatagagctt
gccataagcatggcacaggagggggatgttatcctaatagcgggcaaaggacacgaagac
taccaagaaataaagggtgtaaaatatccctttaaagactctgaagtggtcaaggaggtc
ctcggtgtgtga
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