Pseudoalteromonas lipolytica: D0907_02665
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Entry
D0907_02665 CDS
T05890
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
pdj
Pseudoalteromonas lipolytica
Pathway
pdj00300
Lysine biosynthesis
pdj00550
Peptidoglycan biosynthesis
pdj01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pdj00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
D0907_02665
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
D0907_02665
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pdj01011
]
D0907_02665
Enzymes [BR:
pdj01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
D0907_02665
Peptidoglycan biosynthesis and degradation proteins [BR:
pdj01011
]
Precursor biosynthesis
Amino acid ligase
D0907_02665
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
SRP54
Motif
Other DBs
NCBI-ProteinID:
AXV64253
LinkDB
All DBs
Position
561283..562761
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AA seq
492 aa
AA seq
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MRDLKPILNHIDVEANSLLVNQLRLDSRDVHPGDVFVAIKGHQLDGGQFIKKAIESGAVA
VIADRLCEFESHFEPLYLVSDLAKKLPALAAAFYQQPSAELDLVGVTGTNGKSTTTAMIA
HLAQQCHKSAAVIGTLGYGHPEQLTPLANTTPSSVDLQRILSELRDQHMNVVAMEVSSHG
LVQQRVDHCQFKAAVFTNLSRDHLDYHGTMDAYGDAKLMLLRDHNPETVVLNQDDAQVEQ
WLEKYDFNNLICYGHKNLAPKGARYVYFSDVVYSNTGISATFETSWGHAEVQSALFGEFN
LYNLAAAMATLLGMGYPLSQLVDACKSLQPVAGRMQAFSAPGQPTCIVDYAHTPDALALA
LQALQKHVPGGVSCVFGCGGDRDKGKRPMMAKAAEGNADRIIVTSDNPRSEDPNAIIADV
VAGLEHPERAHCEADRARAISYAIEQANADDVILIAGKGHEDYQIIGDQRIDFCDRQYVQ
QQLKEKSQGAQL
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgatttaaaacccattcttaatcatattgacgtggaggctaattctttattagtc
aatcaactgcgtctagatagtcgcgatgttcatcccggtgatgtatttgtggcaattaaa
ggccatcagcttgatggcggccagtttataaagaaagccattgaaagtggtgcggttgct
gtgattgctgatcgcttatgtgagtttgaaagtcatttcgaaccactttacttagtgtct
gatttagctaaaaagctgccagcactcgctgctgcattctaccaacagccctctgctgag
ttagatttagtgggcgtaacaggcaccaatggcaaatcaacaacgacggcaatgatcgcg
catttagcgcagcaatgccataaatctgcagcggttattggtacgctgggttatggtcac
cctgaacagctaacacccttagccaataccactccatcaagtgttgatttacaacgtatt
ttatctgaactacgtgatcaacacatgaatgtggttgcaatggaagtttcatcgcatggt
ctggtgcaacagcgcgttgatcattgtcagtttaaagccgccgtttttaccaatttgtcg
cgtgatcacttagattatcatggcacaatggatgcgtatggcgatgccaaattgatgttg
ctgcgtgatcataatccagaaactgttgtgcttaatcaagacgatgcacaagtcgaacag
tggttagaaaagtacgacttcaataacctaatttgttatggccataaaaatttagcaccg
aaaggcgcacgctatgtctattttagcgatgtcgtttatagcaacaccggtatttcggca
acgttcgaaacaagctggggtcacgctgaggtgcaatctgcattatttggtgaatttaac
ctctataacctagcagcagcaatggccacgctattaggtatgggttacccgctttcacag
ttagtagacgcatgtaaatcattgcaaccggttgctgggcgcatgcaagcgtttagcgca
ccgggtcaaccaacttgtattgttgactatgcacatacaccagatgcacttgcactggca
ttgcaggctttacaaaagcatgtccccgggggcgtgagctgtgtgtttggctgtggcggt
gaccgcgataaaggcaagcgtccaatgatggcaaaagcggctgaaggtaatgctgatcgt
attatcgtcaccagcgataacccacgcagtgaagacccaaatgcaattattgctgacgtg
gtcgcaggacttgagcacccagagcgcgcgcactgcgaagcagaccgtgctcgtgcaatt
agttatgcaatagagcaagcaaatgccgatgatgtgattcttattgcaggcaaaggccat
gaagactatcaaattattggcgatcagcgtatcgacttctgcgaccgccaatatgtacaa
caacaactaaaagaaaaatcgcaaggggcgcagttatga
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