Pseudoalteromonas lipolytica: D0907_06200
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Entry
D0907_06200 CDS
T05890
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
pdj
Pseudoalteromonas lipolytica
Pathway
pdj03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pdj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
D0907_06200 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pdj03400
]
D0907_06200 (nth)
Enzymes [BR:
pdj01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
D0907_06200 (nth)
DNA repair and recombination proteins [BR:
pdj03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
D0907_06200 (nth)
Prokaryotic type
D0907_06200 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
HHH_5
HHH_8
Motif
Other DBs
NCBI-ProteinID:
AXV64893
UniProt:
A0AAD0RYH5
LinkDB
All DBs
Position
complement(1353679..1354311)
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AA seq
210 aa
AA seq
DB search
MNKEKRYEILSRLRAENPHPETELEYSSPFELLVAVTLSAQATDVGVNKATRKLFPVANT
PQAILDLGLEGLRDYIKTIGLFNSKANNVYKMCEILVNKHNAEVPENREALEALPGVGRK
TANVVLNTAFGWPTIAVDTHIYRVSNRTKFAMGKDVVAVEQKLEKVVPKEFKVDVHHWLI
LHGRYVCTARKPKCGSCIIEDLCEFKDKTE
NT seq
633 nt
NT seq
+upstream
nt +downstream
nt
atgaataaagaaaaacgctacgagatcctgtctcgcctccgcgcagaaaaccctcaccca
gaaactgagcttgaatactcaagccctttcgagttgttggttgcggttaccctatcagct
caagcaacggatgttggtgtaaataaagcgacccgtaagctttttcctgtcgcaaacacg
ccccaagctattcttgatttaggtcttgaaggcctgcgtgattacataaaaacaattggt
ttgtttaattctaaagccaataatgtctataaaatgtgtgaaattctggtcaataaacac
aacgctgaagtaccagaaaaccgcgaagcccttgaagccctaccgggcgtgggtagaaaa
acggctaacgttgttttaaataccgcttttggctggcctaccattgccgtggatacccat
atttatcgcgtctctaaccgcaccaaatttgccatgggtaaagacgtcgttgcagttgaa
caaaaactagaaaaagtcgtacctaaagaatttaaggtcgatgtacaccactggttaata
cttcatgggcgctacgtgtgtactgctcgtaaaccaaaatgcggcagctgtattatcgaa
gacttgtgtgagtttaaggataaaacagagtaa
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