Pseudoalteromonas lipolytica: D0907_09360
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Entry
D0907_09360 CDS
T05890
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
pdj
Pseudoalteromonas lipolytica
Pathway
pdj01501
beta-Lactam resistance
pdj01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
pdj00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
D0907_09360
01503 Cationic antimicrobial peptide (CAMP) resistance
D0907_09360
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pdj03036
]
D0907_09360
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pdj02000
]
D0907_09360
01504 Antimicrobial resistance genes [BR:
pdj01504
]
D0907_09360
Chromosome and associated proteins [BR:
pdj03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
D0907_09360
Transporters [BR:
pdj02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
D0907_09360
Antimicrobial resistance genes [BR:
pdj01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
D0907_09360
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
Biotin_lipoyl_2
HlyD_3
CusB_dom_1
OEP
TPR_MLP1_2
DUF7507
Motif
Other DBs
NCBI-ProteinID:
AXV65467
UniProt:
A0AAD0WCH5
LinkDB
All DBs
Position
2052171..2053376
Genome browser
AA seq
401 aa
AA seq
DB search
MRLPFASAKLSLSALFFVTAPLLLQGCSEAPQQQQGQMHPAAVATMTMTPQDAPFTIELP
ATLSGSKEVEVRARVAGILESRNFEEGQRVEQGHSLFTIDLEPYQLAVDRAQAALDGANA
ALVQANRDVKRLAKLRAEKSVSQRDYDNASSAYDIAKTDLEAAKVALKQAQLNLEYAQVK
APVAGVMGREFVSEGTFVSGPDLLLTQMTQFDPIRIRFGLSEREQLQMRQDVQNGSLTLP
EQGHWQTKIKLQDGSVYGKTGEVNFSDVRINPNTGTSEFQAIIPNPDFQLRPGQFVRIEL
SGAVRKNAIIVPQRAVLDNGTGKFVYVVSKNEQGMDVALPAPVTVGEWVKQPNNEQYQNF
WLIKSGLKEGDNVIVDGMARIFFPGMPVNVGQSAANSNHAE
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atgcgcctgcctttcgcgtctgccaaattatcattatctgcgttgttttttgtaactgca
cctttactattacaaggttgctcagaagcacctcagcagcaacagggtcaaatgcaccct
gccgcggtagcaactatgacaatgacaccgcaagatgccccctttactatcgaattacct
gctacgttgtctggttcaaaagaagtcgaagttcgtgctcgcgttgcgggaattcttgaa
tcacgtaattttgaagaaggtcaacgtgttgaacaaggtcactctttatttactatcgac
cttgaaccttatcaattagcggttgaccgtgctcaagctgcacttgatggagccaatgca
gcgttagtacaagctaacagagatgtaaaacgtttagctaaattacgcgcagaaaaatct
gtgtcgcaacgcgattacgataatgcgagttcagcttacgacattgcaaaaacagatctc
gaggcggcgaaagttgccctaaaacaagcgcagttgaaccttgaatatgcacaagttaaa
gccccggttgccggtgtaatgggtcgtgaatttgtctcagaagggacctttgtatcgggg
cccgatttattgcttacacaaatgacacagtttgatccaatccgtatccgctttggttta
tctgagcgagagcagttacaaatgcgtcaagatgttcaaaatggctctctgaccttacct
gagcaaggccattggcaaacaaaaattaaacttcaagacggctctgtgtacggtaaaaca
ggtgaagttaacttctcagatgtgcgtattaacccaaatacaggcaccagtgaatttcaa
gcgattattccaaaccctgattttcaattacgtcctggtcaattcgtccgtattgagtta
agtggtgctgtgcgtaaaaatgcgatcattgtgccacagcgtgctgtactggataacggc
acaggtaagtttgtgtacgttgtcagtaaaaatgagcaaggcatggatgttgccctgccg
gctcccgtaacggtaggagaatgggttaaacaaccaaataacgagcaatatcagaacttt
tggctgattaaaagtggccttaaagaaggcgataacgtgatagttgatggaatggcgcgt
attttcttccctggtatgccagtgaatgttggccaatcggctgcaaattcaaaccacgca
gaataa
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