Pseudoalteromonas lipolytica: D0907_12180
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Entry
D0907_12180 CDS
T05890
Name
(GenBank) multidrug efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
pdj
Pseudoalteromonas lipolytica
Pathway
pdj01501
beta-Lactam resistance
pdj01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
pdj00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
D0907_12180
01503 Cationic antimicrobial peptide (CAMP) resistance
D0907_12180
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pdj02000
]
D0907_12180
01504 Antimicrobial resistance genes [BR:
pdj01504
]
D0907_12180
Transporters [BR:
pdj02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
D0907_12180
Antimicrobial resistance genes [BR:
pdj01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
D0907_12180
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ACR_tran
SecD_SecF_C
MMPL
Motif
Other DBs
NCBI-ProteinID:
AXV65976
LinkDB
All DBs
Position
complement(2703868..2706981)
Genome browser
AA seq
1037 aa
AA seq
DB search
MISKTFISRPKFALVISIVITIAGLISMTLLPVNMYPQITPPQVQISTSYPGASAQIVEE
SVIRPIEEQVNGVEDMMYIESTSTNNGTANITVYFKVGTDTDIAQVNVQNRVALAEAGLP
EEVKRQGVSVKKKSSSMLLGINLYSSKDNIDAIFLSNYATNYLTEPLGRINGVASAEVMG
EQTYSMRLWLRPDRMASLGLTVADVRSALQEQNTIVAAGKLGAAPTGPSQQFEYSIQAKG
RLKTPEEFGQTIIRSSKDGNFVRLHDIARIEMGAASYSTSAKLNQQDTAFIVIYQLTEAN
ATQVAEDVKARMAELAKQLPDGIEYSIPYDTTEFINRSIEEVVVTLLQAVGLVILVVFLF
LQNWRATLIPTVAIPVSLVGTFAFMMMMDYSINLITLFGLVLAIGIVVDDAIIVIENVER
ILKEEKLPIKEAVTKAMEQVSGPIVATTLVLLAVFVPVGFMPGITGELYKQFSVTISFAV
LISSVNALTLSPALCTLLLNEKAMKPIKWLAPFENIITRSTSGYSKVVNFILKRSARIAL
FAVIIFAAAGWLVKAVPTGFVPAEDQGFLFVDVQLPDAAASNRTKEVMHKLGDIIKNEPA
ATDFIAVSGFSLLGGAGSNNALGIVVLKDWEERTDANLGLRAVLGRLMGQFWAMPDAQIM
AFNPPSIPGLGTSAGFEFRLQDSEGREPAALSQVLNGLVYEANQRPELSNVYSTFRANVP
QYFLEIDRNKAKAQGVALSDIFLTLQAQLGSLYVNDFNQFSRTYRVIMQAESQYRQNPAD
LQYYYVRNDEGVMVPLTTLAKLEPILGPTSLTHFNLYRSASISGQPAQGYSSGDAIAVMQ
ELAAKLPSGYVYEWAGQSKQEIEAGNVAPILFGLAVVFVYLFLVAQYESWTIPFSVIAAV
PLALFGAMLALYVIGMENNIYAQVGLVLLIGLSTKTAILIVEFAMEERAAGKGIVEAALN
AAKLRFRAVLMTALSFVLGVLPLVFASGAGAGSRISLGVTVLFGMLAATIFGTLLVPLFY
TLVQAMREKVKGQRVEN
NT seq
3114 nt
NT seq
+upstream
nt +downstream
nt
atgattagtaaaacgtttatatctcgccctaaatttgcgctggtaatatcgatagtcatt
acgattgcgggtttaatctcaatgacattattgccggtgaatatgtacccgcagatcacg
ccaccgcaagtacaaatttcgacaagttaccccggagccagtgctcaaatagtggaagag
tcggtgatcaggcccattgaagagcaagtcaatggggttgaagacatgatgtacatagaa
tcgacttcgacaaataacggcacggcaaatattactgtttattttaaggttggtactgac
acagacatagcacaagtgaacgtgcaaaatcgtgttgcgctcgctgaagcgggattacct
gaagaagtaaagcgccaaggggtatcggttaagaaaaagtcgagctctatgttgttaggg
attaacctttactcaagtaaagataatatcgacgctatttttctaagtaactatgcaaca
aactatttaacggagccacttggtcgtataaatggggttgcttctgcggaggtgatgggt
gagcaaacctattcgatgcgtttatggcttcgcccagatcgaatggcatcattaggctta
acggtggccgatgttcgaagcgcattgcaagagcaaaataccattgttgcagcaggtaag
ttaggcgcggctcctacggggcccagtcagcaatttgaatattcgattcaagcaaaaggg
cgcttaaaaaccccagaggaatttggccaaaccattattcgttcgagtaaagacggtaat
tttgttcgtttacatgatattgcccgtatcgaaatgggggcggcaagctacagcacctcc
gctaaattgaatcagcaagatacagcatttatcgttatttatcagttaacagaagccaat
gccacgcaggttgcagaggatgttaaagcccgtatggctgagctggcaaagcagttaccc
gatggcatcgagtattctattccttacgatacaaccgaattcattaatcgttctattgaa
gaagtagtggtaacccttttacaagcggttggtttggttattttagtggtatttttgttt
ttacaaaattggcgcgcaaccctgattcccactgttgctattccggtgtctttggtgggg
acgtttgcttttatgatgatgatggattactccattaacttaatcaccttatttggttta
gtactggcaatcggtattgtggtggatgatgcgattatcgttatagaaaatgttgagcgt
attttaaaagaagagaaactaccaataaaagaagccgttactaaagcaatggaacaagtg
tctgggcctattgttgcaaccacactggtgttgctagcggtgtttgtaccggttggattt
atgcctggcatcaccggagagttatataaacagttctcggtgactatttcatttgcagtg
ctaatttcctcggtgaatgcattaaccttgagtccggcgctttgtacgctattactcaat
gaaaaagcgatgaaaccgattaagtggctagccccatttgaaaatattattacgcgctcg
accagtggctacagtaaagtcgttaactttattctaaagcgtagcgcacgaatagcgctg
tttgcggttatcatttttgcggccgcgggatggttagttaaagcagtccccaccggattc
gtgccagccgaagaccaaggttttctatttgttgatgtgcaactgccagatgctgcggca
agtaaccgcaccaaagaagtcatgcataaattgggtgatattattaaaaatgaacccgca
gcaactgattttatcgccgtttcaggtttttcattattaggcggtgcaggttcaaataat
gccttgggtattgtggtactaaaagattgggaagagcgcacagacgctaatttaggtctg
cgagcggtgttaggtcgtttgatggggcagttttgggcgatgccagacgcacagataatg
gcatttaacccgccatcaataccggggcttggcaccagtgccggttttgaatttagactg
caagacagtgaagggcgtgaacccgctgcgctttctcaggtgcttaacggcttagtatac
gaggctaatcaacggcctgaactgtcaaatgtgtacagtacattcagagcaaatgttccg
cagtactttttagaaattgaccgtaataaagccaaagcacaaggtgtggcgttgagtgat
atcttcttaacgctgcaagcacagctaggttctttgtacgttaatgactttaatcaattt
agccgaacgtatcgggtcataatgcaagccgaaagtcagtatcgtcaaaaccccgcagac
ttacagtactattacgtgcgtaacgacgaaggggtaatggttcctttaacaacactggcc
aaacttgaaccgattcttggcccgacaagtttaacgcactttaatttgtaccgaagtgcc
agtatcagtggccagccagcgcaagggtattcaagtggggatgcgattgctgttatgcaa
gaattggccgctaagctaccctctgggtacgtgtatgagtgggcagggcaatctaagcaa
gaaattgaagcgggcaacgtcgcgccaattttatttggtttagcggtcgtatttgtttat
ttgttcttagttgcgcagtacgaaagctggacgattccattttcagttattgcagctgtt
cctttagctttgtttggtgccatgcttgcactgtacgtgattgggatggaaaacaatatt
tatgcgcaagttggtttagtgttgctgataggtctgtcgacgaaaacggccatattaatt
gttgaatttgcgatggaagagcgtgccgccggaaaaggcatcgttgaggcagcactcaac
gcagcaaaattgcgttttagagcggtattaatgacggccttgtcatttgtgcttggcgta
ttaccgcttgtgtttgcgagtggggcaggggcaggcagccgaatatcattaggtgtgact
gtgctctttggtatgctagcggccactatttttggcacgttgcttgttccgctattttat
acattagtgcaagctatgcgtgaaaaagtgaaaggccaaagggtcgaaaactaa
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