KEGG   Penicillium digitatum: PDIP_18740
Entry
PDIP_18740        CDS       T04849                                 
Name
(RefSeq) ABC transporter, putative
  KO
K12608  CCR4-NOT complex subunit CAF16
Organism
pdp  Penicillium digitatum
Pathway
pdp03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:pdp00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    PDIP_18740
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pdp03019]
    PDIP_18740
Messenger RNA biogenesis [BR:pdp03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Ccr4-NOT complex
     PDIP_18740
SSDB
Motif
Pfam: ABC_tran AAA_21 SMC_N AAA_29 PduV-EutP RsgA_GTPase AAA_15 ORC-CDC6-like AAA_23 AAA_25 AAA_28 DUF3584 AAA_22 AAA_14 AAA_16 Arf SRP54 DLIC AAA_13 Zeta_toxin
Other DBs
NCBI-GeneID: 26230197
NCBI-ProteinID: XP_014537565
UniProt: K9H012 A0A7T6XQC8
LinkDB
Position
Unknown
AA seq 280 aa
MADINSTLPNIEVQNLSYKFQDGSSGLEDVSMSLPTGSRTLLIGANGAGKTTLLRLLSGK
RLAPNNTIAIGGKDPFKDSLDGVTYLGVEWVLNSIVRTDIDVPTLLASVGGNAYPERRDE
LIDILDVDLRWRMHAVSDGERRRVQLAMGLLRPWQILLLDEITVDLDLLSRSNFLAFLKR
ETETRACTIVYATHILDNLAQWPTHLAHMHLGKVKALGSVESFHEQVPEWTSENSRLGEL
VLKWLKEDMQARGPRNGRGNQAKTYQSLEGIGGYGLEKHD
NT seq 843 nt   +upstreamnt  +downstreamnt
atggcggatatcaattccactctcccaaacattgaggtacaaaacctctcgtacaagttc
caagatggctccagtggcctggaggatgtatccatgagcctaccaactggaagccgcact
ctactgatcggcgcaaatggagcggggaaaaccaccctcctccgcctcctctcaggaaag
cgccttgcacccaataacaccattgccattggcggcaaagaccccttcaaggatagccta
gatggtgtgacctacctgggagtcgagtgggtattgaacagcatagtccgcacagatatc
gatgtgccgacgctgctcgcctccgtcggcggaaatgcttacccagagcgccgggatgag
ctgatcgatatccttgatgtcgatctgcgctggcgcatgcatgccgtctcagatggagaa
cgccgccgtgtgcagctggctatgggcttgctgcgaccttggcagattctgctgctcgac
gagatcactgtcgatctggaccttttgtccaggagcaatttcctggctttcctgaaacgg
gagactgaaacccgtgcctgcactattgtttatgccacccatattttggataatctcgcc
cagtggcctacccatctggcacacatgcacttgggcaaggtcaaggcgctaggtagtgtt
gagtcattccatgaacaagtccctgaatggacttcggaaaatagtcgccttggagagctc
gtccttaagtggctcaaggaggatatgcaggccagaggtccccggaatggtcgtggtaat
caggccaagacctaccagtcccttgaaggcattggaggttacggactggaaaaacacgac
taa

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