KEGG   Penicillium digitatum: PDIP_22460
Entry
PDIP_22460        CDS       T04849                                 
Name
(RefSeq) Ubiquitin ligase subunit HrtA, putative
  KO
K03868  E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
Organism
pdp  Penicillium digitatum
Pathway
pdp03420  Nucleotide excision repair
pdp04111  Cell cycle - yeast
pdp04120  Ubiquitin mediated proteolysis
pdp04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:pdp00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    PDIP_22460
   04120 Ubiquitin mediated proteolysis
    PDIP_22460
  09124 Replication and repair
   03420 Nucleotide excision repair
    PDIP_22460
 09140 Cellular Processes
  09143 Cell growth and death
   04111 Cell cycle - yeast
    PDIP_22460
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:pdp04121]
    PDIP_22460
   03400 DNA repair and recombination proteins [BR:pdp03400]
    PDIP_22460
Enzymes [BR:pdp01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.32  cullin-RING-type E3 NEDD8 transferase
     PDIP_22460
Ubiquitin system [BR:pdp04121]
 Ubiquitin ligases (E3)
  UBL E3 ligases
   PDIP_22460
  Multi subunit type E3
   SCF complex
    Ring finger protein
     PDIP_22460
   Cul2 complex
     PDIP_22460
   Cul3 complex
     PDIP_22460
   Cul4 complex
     PDIP_22460
   Cul7 complex
     PDIP_22460
   Cul8 complex
     PDIP_22460
   Cul9 complex
     PDIP_22460
DNA repair and recombination proteins [BR:pdp03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      PDIP_22460
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      PDIP_22460
SSDB
Motif
Pfam: zf-rbx1
Other DBs
NCBI-GeneID: 26230568
NCBI-ProteinID: XP_014537019
LinkDB
Position
Unknown
AA seq 100 aa
MADVEMKEAATGSSKGKAVAKGSDNADKKKFEVKKWNAVALWAWDIVVDNCAICRNHIMD
LCIECQANQGSSTTEECTVAWGICNVRKPASIPSDCMFAG
NT seq 303 nt   +upstreamnt  +downstreamnt
atggcagatgtggagatgaaggaagccgctactggctcctctaagggcaaggccgtcgcc
aagggctccgacaatgccgacaagaagaagttcgaggtcaagaagtggaacgctgttgcc
ttgtgggcttgggatatcgtcgtcgacaactgtgccatttgccgaaaccacatcatggac
ttgtgcatcgaatgccaggccaaccaaggatcatcaacaacggaagagtgcactgttgcc
tggggtatctgcaacgtgagaaaacccgcatccatcccgtccgattgcatgttcgcaggc
taa

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