KEGG   Penicillium digitatum: PDIP_48370
Entry
PDIP_48370        CDS       T04849                                 
Name
(RefSeq) hypothetical protein
  KO
K10777  DNA ligase 4 [EC:6.5.1.1]
Organism
pdp  Penicillium digitatum
Pathway
pdp03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:pdp00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    PDIP_48370
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pdp03400]
    PDIP_48370
Enzymes [BR:pdp01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     PDIP_48370
DNA repair and recombination proteins [BR:pdp03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    DNA Ligase 4 complex
     PDIP_48370
SSDB
Motif
Pfam: DNA_ligase_A_M
Other DBs
NCBI-GeneID: 26233154
NCBI-ProteinID: XP_014533831
UniProt: K9FW25 A0A7T6XMD1
LinkDB
Position
Unknown
AA seq 787 aa
MANGRRMSIERKYDGEYCQIHVDLSNRLTPIQIFSKSGKDSTADKDKVIPVIEESLRTGL
PDCKFAHRCIVEGELLVWNDQDRKLMDFNKIRRFLPRSGIMIGVDNDSPPQPYEHLMIMF
FDILLLDDDVCLAKPHRERRLLLQKVVKTIPGRAELAYQEVLDFNRVDSYHRLEKSFEKA
IAKRWEGYVLKASDEPYFPLYCTGVDHMFGRWIKLKKDYIPGLGDTLDLALVGASYNARD
APDLGQIKGLKWTHFLVGCLLNPEHVKGGNALPRFRVVDVISRHCMSIRTMQTLNQTGEF
YACEPETFEGFHIEYGHEALPTATTLFKRPFVVEMLGSGFEKPSGARYFTLRFPRILKIH
LDRTLEECTSFHELLTAAEHARAVPADELEERERWSKRLKVGSGLDQSVVRSPSPEATCS
DTDEETNSASSQVPQATTTSGESFMDICLSMDRMREDSIKKDSHDQSYNDRPLSPLVYID
EILIHTEDKNPVLGTSMLVESKSPSSHQHSSQKDGQIASQESSVLIYPMRTTSLISAHEE
HSRELHDAQEQLSDKQLVPKSPRQKCKVSPRSPLTTIPIWTPKTSLGSFTLPETDKTPSN
DCESRDLNEFIRCLCSDKSASSLQQSNPYATSQGTVFGIVLFDPKASQLGEEMHRLATTL
SSFVHSGTSPLPSMGSIFFLGSSMVECDLNPDDIRFCLRETWKDIGRDHFYGCLSWNLIK
RSDETSIGREHLRSESNRNLHDTTKETAQPPNSGPRTPWIEMTFDETAIAVLGEYISIEP
LAHVMHN
NT seq 2364 nt   +upstreamnt  +downstreamnt
atggccaacggtcgtcgaatgagtatcgaacgtaaatacgatggtgaatattgtcagatc
cacgtggatctctctaacagactcacccccattcagatcttctccaaaagtggcaaggac
tcaaccgcagataaagacaaggtcattcctgtaatagaagaatcgctccgtaccggattg
cctgactgcaaatttgctcaccgctgtatcgttgaaggagaactgcttgtatggaatgac
caggatcgtaaactgatggactttaacaaaattcggaggttccttccgcgatctggcatc
atgattggcgttgataatgattctccgccgcaaccgtacgagcacctgatgatcatgttc
tttgacattcttcttcttgatgacgacgtatgccttgccaagcctcatcgggaaagacga
ctccttttacagaaggtggtgaagaccatcccgggccgagcggagctcgcctatcaggaa
gttttggacttcaaccgagttgatagctatcatcggctcgaaaagagtttcgaaaaagca
attgctaaacgttgggagggatatgtcttgaaggcttctgacgagccttattttccattg
tactgcactggtgtggatcatatgtttggccgatggattaaactcaagaaagattatata
cccggccttggagacactttagaccttgcgttggtcggagctagctataacgcgcgggac
gctcctgatctgggtcaaataaaaggactgaaatggactcactttcttgttggttgtctt
ctcaacccagagcatgttaaaggcggcaacgcattgccgcgtttccgagtcgtcgatgtg
attagccgacattgcatgagcattcgcaccatgcaaaccctcaatcaaaccggcgagttc
tatgcatgtgaacctgagacgttcgaaggctttcacatcgagtatgggcacgaagccctt
cccactgcaaccaccctgtttaagcgcccatttgtcgtcgagatgttgggcagtggattt
gaaaaaccatctggtgcaagatacttcacacttcgatttcctcgaattttgaagatacac
ttggaccgaacgctggaagagtgtacctctttccatgaactgttgactgcagcagaacat
gcccgtgctgtgccagcagatgaactagaagaacgcgagagatggtcaaaacgcctgaag
gttgggagtggacttgatcaatctgttgtgcgatctccaagcccagaagcgacttgttca
gacaccgatgaggagacgaattccgcgtcatcccaggttccgcaagccaccactacttct
ggagaaagctttatggacatatgtttatcaatggataggatgcgtgaagattcgataaag
aaagacagtcatgaccagtcatacaatgaccgtccattatcccctctagtctacatcgat
gagatattaatacacactgaggataaaaatcctgttctcgggacgagtatgctcgtggaa
agcaaaagcccatcgtctcatcagcactccagccagaaggatggacagattgcatcgcag
gaatcttcagtgctaatatatcccatgcggacaaccagcttgatttctgcacacgaagag
cactctcgagaattacacgacgcacaggaacagctttcggacaagcaattggtgcccaaa
tcacccaggcagaaatgcaaggtgtcacctagatctcctttgacaactatccccatttgg
acacctaaaacctcactgggaagctttacacttcccgaaactgacaaaacgcctagcaat
gattgcgaatcccgtgatttgaacgaatttattcggtgtctctgctcggataaatctgct
tcttccctacaacaatcaaacccctatgctacgtcacaagggacagtgtttggaattgtc
ctgtttgatcccaaagcaagtcaactaggtgaagaaatgcaccgcctcgctaccaccctt
tccagcttcgtccattctggaacaagtccactcccctccatgggaagcatcttcttttta
ggctcgagcatggtggaatgtgatcttaatcccgatgatattcgcttttgcttgcgtgag
acgtggaaagacattggacgtgatcatttctatggctgtctttcatggaatcttatcaag
cgatctgatgaaacatcaatcggaagagagcatctccgctctgaatcgaatcgcaatctt
catgacacgactaaggagacggcacagcccccgaactctggaccaaggaccccatggatt
gagatgacctttgacgaaacagccattgctgtgctgggcgagtatatctcaatcgaacct
ctagctcatgttatgcataattga

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