Penicillium digitatum: PDIP_59620 Help Entry PDIP_59620        CDS       T04849                                  Name (RefSeq) DNA ligase 4   KO K10777   DNA ligase 4 [EC:6.5.1.1] Organism pdp  Penicillium digitatum Pathway pdp03450   Non-homologous end-joining Brite KEGG Orthology (KO) [BR:pdp00001]  09120 Genetic Information Processing   09124 Replication and repair    03450 Non-homologous end-joining     PDIP_59620  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:pdp03400]     PDIP_59620 Enzymes [BR:pdp01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.1  DNA ligase (ATP)      PDIP_59620 DNA repair and recombination proteins [BR:pdp03400]  Eukaryotic type   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     DNA Ligase 4 complex      PDIP_59620 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  DNA_ligase_A_M DNA_ligase_A_N BRCT_2 DNA_ligase_A_C RNA_ligase BRCT DNA_ligase_IV RTT107_BRCT_5 LIG3_BRCT mRNA_cap_enzyme Motif Other DBs NCBI-GeneID:  26234278 NCBI-ProteinID:  XP_014533188 UniProt:  K9GB89 LinkDB All DBs Position Unknown AA seq 974 aa AA seqDB search MDSDEILSQELLGQEKEEDIKANELKKKLSGPAPARRKVGPNGKGAASLNPFERRRDVIE RFISRWRKDVGNDIYPALRLILPDKDRDRPMYGIKEKAIGKMLVKIMKINKESEDGYNLL NWKLPGQGATTRMAGDFAGRCFDVLSKRPMRTEPGDMTIDEVNEKLDKLSAASKEDEQLP ILTEFYRRMNPEELLWLVRIILRQMKVGATERTLFDVWHPDAENLYSISSSLRRVCWELH DPNIRLEGEERGIALMQCFQPQLAQFQMHSFEKIIARMKPTEDDHVFWIEEKMDGERMQL HMAPDDSIQGGRKFGFWSRKAKEYTYLYGNGIYDENGALTRHLKDAFVDGVQSIILDGEM ITWDPEQDAMVPFGTLKTAALAEQRNPFSNAPRPLFRVFDILHLNGRDLTKYALRDRRNA LEKTIRPVYRRFEIHSYEEATTTTEVEKALRKVVAEASEGLVLKNPRSPYRLNERHDDWM KVKPDYMTEFGESLDVVVIGGYYGSGHRGGALSSFLCGLRVDDSTQAAEKCWSFCRVGGG FTAADYQEVRHHTEGKWKVWDAKKPPTNFIELAGGDAQHERPDMWIKPSDSIVLCAKAAS VAISDQFRMGLTLRFPRFKKLRKDKDWKSALSVQEFLDLKSNAEQEHREKEFSVDNSRKK RVKRATKKPLTVAGYDDNIDVQYLEPSGHIFDELNFFVMTESTSPEKKTKLQLEQLVKAN GGKIYQTKTAAVDTLCVADRRTVKVASLQRSGEQNIIRPSWLIDCIKQNEIDIGLPDLLL PFEPRHMFFMREDEEEEVVANVDQFMDSYARDTTVEELKEVFKQMEQNQEQPDHALDPET IQRVEARIQEKINAGYTVPCGWLFRGLKFYFHSNGDRQDESASQELWKKSQPLYLARNTA RFAGAESASSLKSSGTTHVIVDPETLSSADISSLRKSLAEKPGAKMPHLVSASWVDECWK NRTLLDEERFPVPR NT seq 2925 nt NT seq  +upstreamnt  +downstreamnt atggattccgacgagatcctaagtcaggagctcctggggcaagagaaagaagaagacata aaagcaaatgaactcaagaagaagctatcagggcctgctccagctcgccgaaaagttggt cccaatggcaaaggtgctgcgagtctcaacccgttcgagcgccggcgcgatgtgattgag cgcttcatttcacggtggcgcaaggatgtcggcaacgacatttaccctgctcttcgactg attcttcccgacaaagatcgcgatcgaccaatgtacgggatcaaggagaaggctatcggg aagatgctcgtcaagatcatgaagatcaacaaagaatcagaagatggatacaatcttctg aattggaagcttcctggccagggtgctacaacacgcatggcgggtgactttgcgggaaga tgcttcgatgttctctcgaagcggcccatgcggaccgagccgggtgacatgacgatcgac gaggttaatgagaagctggataagctatcggctgcatcaaaggaggatgaacaactgcca atcttgacggaattctaccggaggatgaaccccgaagaacttctgtggctcgtccgcata atacttcggcagatgaaggttggtgctaccgagcgaacactcttcgatgtctggcatccc gatgccgagaatctgtacagcatatctagcagtctgcggcgtgtttgctgggagctgcat gatcccaatatccggcttgagggagaggagcgtggcatcgcgttgatgcaatgcttccag ccgcagctggcccaatttcagatgcattcatttgagaaaatcattgctcgtatgaaacca acagaagacgaccacgtcttttggattgaggagaaaatggatggtgagcgtatgcaactc catatggcgcctgacgattcgatccaaggcggtcgaaaatttggcttctggtcgcgcaaa gcgaaggaatatacctatctatacgggaacggaatttacgatgagaacggtgctctgaca aggcatctaaaagatgctttcgtggatggagtacagagcattattctcgacggcgaaatg attacctgggatcctgaacaggacgccatggttccctttggcacgctcaaaaccgcggcc ctggcggaacaacgcaatccgttctcaaatgctccacgacccttgttccgtgtttttgat atattacatctcaatgggcgcgacctaacaaagtatgcccttcgtgatcgtcgtaatgcc ctggagaagactatccgacctgtatatcgccggtttgaaattcactcttatgaggaagct actaccaccacagaagttgaaaaggctttgcggaaggttgtcgctgaggcgtcagagggt cttgtattgaagaacccgcgctctccatatcgactgaacgaacgccatgatgactggatg aaagtaaaaccagactatatgaccgaatttggagagtcccttgacgttgttgtgattggc ggatactatggttcaggtcatcgaggaggtgcgctgtccagttttctttgtggactacga gtcgacgacagcacacaagcagcagaaaaatgctggtccttttgtcgggttggtggcggg ttcacagcagctgactaccaggaggtccgccatcatacagagggcaagtggaaggtgtgg gatgcgaaaaagcctccgactaactttatcgaactggcgggcggagacgcccagcatgaa cgtccagatatgtggatcaaaccatccgactcgattgtcttgtgtgcaaaagctgcatct gtcgcaatcagtgatcaatttcgcatgggattgacgttgcgcttccctcgctttaagaaa ttgcgcaaggacaaggactggaaaagcgcgctctcggttcaggagtttcttgatctaaag tctaacgcagagcaagagcatcgggagaaggagttctctgttgataactctcggaagaaa cgagtgaagagggccactaagaaaccgctcaccgttgccgggtacgacgataatatcgat gtccagtatcttgaaccttctgggcatatcttcgatgagcttaacttctttgtaatgacc gagtcgaccagcccagaaaagaaaacaaaacttcaactggaacaactcgtgaaggctaat ggtggtaagatatatcaaaccaagacagctgcggtagacaccctctgtgttgctgatcgg agaacggtcaaagtagcctcattacaaaggagtggagagcaaaacatcattcgaccatct tggcttatcgactgcatcaagcagaatgagatagatataggcctgccagatcttcttctt ccgttcgaaccacgacacatgtttttcatgagagaggacgaagaggaagaagtcgtagca aatgtcgaccaatttatggacagctacgctcgcgatacaactgttgaggagctcaaggaa gtattcaagcaaatggaacaaaaccaagagcagcccgaccatgccttggacccagaaacc attcagagagtcgaggctcgcatccaggaaaaaataaatgctggttacacagtgccctgc gggtggctcttccgaggcttgaagttttacttccactcgaacggggatcggcaggacgaa tcagcctcccaagaactgtggaagaagagccaaccactctacttggctcgcaacacagcc cggtttgcaggtgccgagagcgccagctccttgaagagctcgggcaccacacatgtgata gtcgacccggagactttgtcgtcagcggacatatcatctctccgaaagtctctggccgag aagccaggtgcgaaaatgccgcatcttgttagtgcgagctgggtggacgaatgctggaaa aatcgcacattgctggatgaagagagattcccggttccgcgatga

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