Paenibacillus durus: PDUR_19840
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Entry
PDUR_19840 CDS
T03297
Name
(GenBank) UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
pdu
Paenibacillus durus
Pathway
pdu00300
Lysine biosynthesis
pdu00550
Peptidoglycan biosynthesis
pdu01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pdu00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
PDUR_19840
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
PDUR_19840
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pdu01011
]
PDUR_19840
Enzymes [BR:
pdu01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
PDUR_19840
Peptidoglycan biosynthesis and degradation proteins [BR:
pdu01011
]
Precursor biosynthesis
Amino acid ligase
PDUR_19840
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Ortholog
Paralog
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
LpxD
DUF1611
RraA-like
ADH_zinc_N_2
Motif
Other DBs
NCBI-ProteinID:
AIQ13906
UniProt:
A0A089HPL3
LinkDB
All DBs
Position
complement(4378469..4379956)
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AA seq
495 aa
AA seq
DB search
MKLEDLSSCLAAARLYGNGGIEITELQADSRRVKPGDLFICLPGFTVDGHDFAPQAASSG
AAALVVERKLEIDLPQIVVDDSRFAMSVLSNAFFKSPSSRMKMIGVTGTNGKTTTTYLIE
RIMEDHGIKTGLIGTIQMRYGGDSYPMPRTTPESLELQRSLNDMASSGVQCCVMEVSSHA
LEQGRVKGTDFRTAIFTNLTQDHLDYHHTMEEYRAAKGLFFSRLGNVISPWKEERKYAVL
NADDAASSYFAAQTAAEVITYGIDNDANVRASQISITAKGTSFHVDTFKGEADISLKMVG
KFNVYNALAAISAALLEEVPLADIKASLEAVPGVSGRVESVDEGQPYAVVVDYAHTPDGL
ENVLRTVREFAEGKVLTVFGCGGDRDRTKRPLMGKISAKYSDLILVTSDNPRTEDPAAIL
KDIEAGLIEDSVDRSQYELIVDRREAIVKAIDMASPGDVVLIAGKGHETYQLIGGAVLDF
DDRIVAQEAIRGRSH
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atgaaacttgaagatttatcatcctgtctggcggctgcgcgtttatacggaaatggcggg
atagaaattaccgaattgcaggcggattcccgccgtgtaaagccgggtgatctgttcatc
tgcctgcccggatttaccgtggacggacatgattttgcccctcaagccgcatcaagcggg
gcggctgcgcttgtagtcgagcgaaagcttgaaatcgatctgccgcagattgtggtcgat
gacagccggttcgcgatgtccgtcctgtcgaatgcatttttcaagtcgcccagcagccgg
atgaagatgatcggtgttaccggtacgaacggaaagacgacgacaacatatttgatcgaa
cgcatcatggaggaccatggtataaagacggggcttatcggaacaattcaaatgcgctat
ggcggggacagctatccgatgccccggacgacgccggaatcgctggagcttcagcgttct
ctgaatgatatggcgtctagtggcgtgcagtgctgcgtgatggaggtttcctcgcatgcg
ctcgagcaggggcgggtaaaaggaacggatttccgtaccgccattttcaccaatctgaca
caggatcatttggattatcatcatacgatggaagaataccgcgcggcgaagggactgttc
ttctccagacttggaaatgtgatttccccttggaaagaagaacggaaatacgctgtattg
aacgcggacgacgcggcaagctcctattttgcggcccagacggcggcggaagtcattacg
tatggcattgacaacgacgccaacgtccgagcttcgcaaatctccatcacggccaaaggc
acctcttttcacgtggacacctttaagggcgaagctgatatttcacttaagatggtaggc
aaattcaatgtgtacaacgcgcttgccgccataagcgccgctctgcttgaggaagttccg
cttgcggatatcaaggccagccttgaagcagttccgggtgtaagcgggcgtgtggagtcg
gttgacgaaggccagccttacgcggtcgttgtagactacgcgcatactccggacggactg
gaaaatgtgcttcgcacagtccgggagttcgcggagggtaaagtcctgaccgtcttcggc
tgcggcggcgaccgtgaccggactaagcggccgctaatgggcaagatctcagctaaatac
agtgacctcatattggttacttccgacaacccgcgtaccgaagatccggctgcgattctg
aaggatattgaggccgggctgatcgaagacagcgtggaccgcagccaatatgagctgatt
gtcgaccggcgcgaagcaatcgtgaaagctattgatatggcaagccccggcgatgtagta
ttgattgcggggaaaggtcatgagacctatcaactcattggcggcgctgttctcgatttc
gatgaccgaatcgtcgcccaagaagccataaggggtcgaagccattga
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