KEGG   Prunus dulcis (almond): 117612982
Entry
117612982         CDS       T07328                                 
Name
(RefSeq) sm-like protein LSM3B
  KO
K12622  U6 snRNA-associated Sm-like protein LSm3
Organism
pdul  Prunus dulcis (almond)
Pathway
pdul03018  RNA degradation
pdul03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pdul00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    117612982
  09123 Folding, sorting and degradation
   03018 RNA degradation
    117612982
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pdul03019]
    117612982
   03041 Spliceosome [BR:pdul03041]
    117612982
Messenger RNA biogenesis [BR:pdul03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     117612982
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     117612982
Spliceosome [BR:pdul03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    117612982
 Complex C
  U2 snRNP components
    117612982
SSDB
Motif
Pfam: LSM TIG_SUH Glutaredoxin
Other DBs
NCBI-GeneID: 117612982
NCBI-ProteinID: XP_034197507
LinkDB
Position
Unknown
AA seq 97 aa
MASEEESAVKEPLDLIRLSLDERIYVKLRSERELRGKLHAYDQHLNMILGDVEEVVTSVE
IDDETYEEIVRTKKRTVPFLFVRGDGVILVSPPLRTA
NT seq 294 nt   +upstreamnt  +downstreamnt
atggcgagtgaggaagagagtgccgtgaaggagccgttggatctgatacggctcagcctc
gacgagcgcatctacgtcaagctccgctccgaacgtgagctccgcggtaaactccatgct
tatgatcaacacttgaatatgattcttggtgatgttgaagaagttgttacttctgtagaa
attgatgatgaaacttatgaagagattgtccggacgaaaaaacggactgttccctttctc
tttgtcagaggagacggggtcatccttgtttcacctcccctaagaacagcttga

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