Prunus dulcis (almond): 117619981
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Entry
117619981 CDS
T07328
Name
(RefSeq) RING-box protein 1a
KO
K03868
E3 ubiquitin-protein ligase RBX1 [EC:
2.3.2.32
]
Organism
pdul
Prunus dulcis (almond)
Pathway
pdul03420
Nucleotide excision repair
pdul04120
Ubiquitin mediated proteolysis
pdul04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pdul00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
117619981
04120 Ubiquitin mediated proteolysis
117619981
09124 Replication and repair
03420 Nucleotide excision repair
117619981
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pdul04121
]
117619981
03400 DNA repair and recombination proteins [BR:
pdul03400
]
117619981
Enzymes [BR:
pdul01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.32 cullin-RING-type E3 NEDD8 transferase
117619981
Ubiquitin system [BR:
pdul04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
117619981
Multi subunit type E3
SCF complex
Ring finger protein
117619981
Cul2 complex
117619981
Cul3 complex
117619981
Cul4 complex
117619981
Cul7 complex
117619981
Cul8 complex
117619981
Cul9 complex
117619981
DNA repair and recombination proteins [BR:
pdul03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
117619981
TCR (transcription coupled repair) factors
Cul4-CSA complex
117619981
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-rbx1
zf-ANAPC11
zf-RING_2
zf-C3HC4
zf-C3HC4_2
zf-RING_11
DUF8003
Motif
Other DBs
NCBI-GeneID:
117619981
NCBI-ProteinID:
XP_034205950
LinkDB
All DBs
Position
2:16393712..16396317
Genome browser
AA seq
116 aa
AA seq
DB search
MATLDSDVPMVPVGEASSSAGSSTKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDL
CIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH
NT seq
351 nt
NT seq
+upstream
nt +downstream
nt
atggcgacattggattcagatgtgcctatggttccggtaggcgaggcttcaagcagtgca
ggttcatcgaccaagaagcccaagcgatttgagatcaagaagtggaatgctgtcgctctc
tgggcctgggatattgttgttgataactgtgccatttgcaggaaccatatcatggatctc
tgcattgagtgccaagcaaaccaggcaagcgccacaagcgaggagtgtacagttgcttgg
ggggtttgcaaccatgcattccacttccactgcataagccgatggctcaagacccgccaa
gtgtgtccattagataatagcgagtgggagtttcagaagtatggtcattag
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