Prunus dulcis (almond): 117620760
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Entry
117620760 CDS
T07328
Name
(RefSeq) sm-like protein LSM3B
KO
K12622
U6 snRNA-associated Sm-like protein LSm3
Organism
pdul
Prunus dulcis (almond)
Pathway
pdul03018
RNA degradation
pdul03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pdul00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117620760
09123 Folding, sorting and degradation
03018 RNA degradation
117620760
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pdul03019
]
117620760
03041 Spliceosome [BR:
pdul03041
]
117620760
Messenger RNA biogenesis [BR:
pdul03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
117620760
mRNA degradation factors
5'-3' decay
Lsm complex
117620760
Spliceosome [BR:
pdul03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
117620760
Complex C
U2 snRNP components
117620760
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
TIG_SUH
Glutaredoxin
Motif
Other DBs
NCBI-GeneID:
117620760
NCBI-ProteinID:
XP_034206846
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Position
3:complement(13495871..13498696)
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AA seq
97 aa
AA seq
DB search
MASEEESAVKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMILGDVEEVVTSVE
IDDETYEEIVRTKKRTVPFLFVRGDGVILVSPPLRTA
NT seq
294 nt
NT seq
+upstream
nt +downstream
nt
atggcaagtgaggaagagagtgccgtgaaggagccgttggatctgatacggctcagcctc
gacgagcgcatctacgtcaagctccgctccgaccgtgagctccgcggtaaactccatgct
tatgatcaacacttgaatatgattcttggtgatgttgaagaagttgttacttctgtagaa
attgatgatgaaacttatgaagagattgtccggacgaaaaaacggactgttccctttctc
tttgtcagaggagacggggtcatccttgtttcacctcccctaagaacagcttga
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