Prunus dulcis (almond): 117622912
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Entry
117622912 CDS
T07328
Name
(RefSeq) transcription factor PIF4-like isoform X1
KO
K16189
phytochrome-interacting factor 4
Organism
pdul
Prunus dulcis (almond)
Pathway
pdul04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
pdul00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
117622912
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pdul03000
]
117622912
Transcription factors [BR:
pdul03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
117622912
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Motif
Pfam:
HLH
bHLH_SAC51
bHLH_NPAS4
bHLH_LHW
Motif
Other DBs
NCBI-GeneID:
117622912
NCBI-ProteinID:
XP_034209617
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Position
3:16701115..16705653
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AA seq
550 aa
AA seq
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MNSCIPDWNFEADLPLTNQKKPMGPDHELVELLWRNGQVVLHSQTHRKPSPNRPNEARQV
QKQDQQTIRVGGLYGNSSNLTQDEDTGSLIHYPLEDSFDKEFCSHFFSELPSCDPIEIDK
PTKQFEEEKFAKFGASDTPHLVSTAPQPNVKSPAGMGYPANPMPPPRYQYNNSTEQNQNL
GGLGKIVNFSTFATPGKGDRGSSRGKIGGKESGNLTQGEVKECSVMTVGSSYVGSNQVLN
DFDVSRASSNCDGTTGLSVGPFYDNVQKMMPQSERGKTDTLDPTLTSSSGGSGSSFGRGG
KRSNVVNSNKRKGRDAEDSECQSEAAELESAAGNKSAQRSGSSRRSRAAEVHNLSERRRR
DRINEKMRALQELIPHSNKTDKASMLDEAIEYLKSLQMQLQVMWMGSGMAPMMFPGMQHY
MSRMGMGMGVGMGPPALPSMHNPMHLPRVPLVDQCMNVAPATNQAIMCQAPVLNPVDYHN
QMQNPAFQEQYARLLGFHHMQTMSQPVNMFRFGSQPMQQNQMTAPTGINSGPLAGGGTAN
DTLRGKMSFF
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atgaattcttgcattcctgattggaattttgaggctgatctccctttgaccaaccaaaag
aaacccatggggccagaccatgaactagtagagctcttgtggagaaatggacaggtagtt
ttgcacagccaaacgcatcgaaaaccgagtcctaatcgtcctaatgaggccagacaagtt
caaaaacaagatcagcagaccataagggttggtggattatatgggaactcaagtaatttg
actcaagatgaagacacaggttccttgatccactaccctcttgaagattcctttgacaaa
gagttctgttcccattttttttctgaattgccttcctgtgatccaattgagattgacaag
ccaaccaaacaatttgaagaagaaaagtttgctaagtttggtgcttctgataccccccat
cttgtttccactgccccccaacctaatgttaagtcccctgctggtatgggatatcctgca
aacccaatgcctcctccaagatatcaatacaataactcaactgagcaaaaccaaaatcta
ggaggcttggggaaaatagttaatttttcaacatttgctaccccaggaaagggtgataga
ggatcttccagaggaaaaataggagggaaagagtctggcaatttaactcagggggaggtt
aaagagtgttcggtaatgaccgttggttcgagttacgttggtagcaaccaagttctaaat
gactttgatgtgagcagggcttcaagcaattgtgatgggacgactggtttatctgttgga
cccttctatgacaatgttcaaaagatgatgcctcagagtgagagagggaaaacagataca
ctagacccaactcttacttcatcttctggtggttctggtagtagttttggcagaggagga
aagcggtctaatgttgtcaatagcaacaaaagaaagggtagagatgctgaggactcagag
tgccaaagtgaggctgctgaacttgagtcagctgcaggaaacaagtcagcacaacggtct
ggatcatccaggaggagccgtgctgctgaagtccataatctctcagaaaggagacggaga
gatcggatcaatgagaaaatgagagcattgcaagagctcatacctcattctaacaagaca
gataaagcatcaatgttagatgaggcaattgaatacttgaagtctcttcagatgcaactt
caggtaatgtggatgggaagcgggatggcaccaatgatgtttccaggcatgcagcactat
atgtcccgaatgggaatgggaatgggagtgggaatgggaccaccagccttgccttcaatg
cacaatccgatgcatttacctagagtccctctagttgatcagtgcatgaatgtggctcca
gcaacaaaccaggctataatgtgccaagcaccggtgttgaatccagttgattatcataac
cagatgcaaaatcccgcttttcaggagcagtatgcgcgtcttttgggcttccatcatatg
cagactatgtctcagcctgtgaatatgttcagatttggctcccagcctatgcaacagaat
cagatgacagcaccaactggcatcaacagtggacctttagctggaggaggtacagctaat
gatactttaaggggcaagatgtcctttttctga
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