Prunus dulcis (almond): 117633173
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Entry
117633173 CDS
T07328
Name
(RefSeq) protein SIEL isoform X1
KO
K13141
integrator complex subunit 4
Organism
pdul
Prunus dulcis (almond)
Brite
KEGG Orthology (KO) [BR:
pdul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pdul03041
]
117633173
Spliceosome [BR:
pdul03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Integrator complex
117633173
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HEAT
Cnd1
HEAT_2
PDS5
Motif
Other DBs
NCBI-GeneID:
117633173
NCBI-ProteinID:
XP_034222765
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All DBs
Position
6:25248251..25253099
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AA seq
958 aa
AA seq
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MEDHVFLTCDHPLNLPTLSTNEPLSLEALASLRSLIINPSTTAPTISSVIETLTRSLQLS
RDPLAIHHTLKLLTDMALRLPHLSGVVFDSVCSHSLLSTDSTRVAAESLDALASIAEGNR
VLAPGIEELDDRLFASLCFSPSLSVRPWLLRNADRFGVQPHLLFTLFLGFTKDPYPYVRK
VALDGLVDLSKNGVIEDPDMIEGCYFRAVELLNDMEDCVRSAAVRTVCAWGLMLVACKSE
TKAYWSDEVFVKLCSTVRDMSMEVRVEAFCALGKIEMVSEEILLQTLSKKVLVTMKGKKS
LAQCSDEQLETSGSSVAGAFMHGLEDEFHEVRKAACHSLRTLTILCAKFAGEALNLLIDV
LNDDSILVRLQAFETMHRMASFDCLTVQETHMHMFLGTLVDNDTLIRSSARKILKLAKLQ
KLKLFRLTIDALLENLERHPQDEADVLSVLFHIGRNHGKFVVRIIEEVFPQMEPMSNGKL
GFDSVRVAALLVLAISAPLSHERDCNIPPTIFSYAVTYLGRISQALSDLMNQNSLLDYLS
QCSRSSGPYAIEFNFKVGEPCLPNANVPTYTSNEIIGSIAMPLPQKTGGTSEILSPTIKK
PREAGTLLVEYQLDVHDEVTKSMNVILAKVKDIWPFVLSGFTNEVLRTLRSCREELATFT
SDSHASAGVFSFTKQYIQIVKLLTKAWVNFLSSTHFPCGMGELDLVLGKLDRRLRDLKSA
FIRLSEEEELHILELILVTCMLRLSKVEICCHLGTLTKLSSMMSRVEYLLRDGSVEPSRF
IIEVGKLSSEFGSSSLNEASFNPLLIRRVLESFSLKQLVLCGRLKHMKAELDIPDNEYEN
PLRFVAGLPVGIPCRITLHNISAESRLWLKMTVNKDNESTQFVFLDLNHFGGCDDVRVFM
FTAPFYKTPKAFSFTIRVCICMECLSEVEDVSSVKRWGPRHELTYLCREKDVYLSMVK
NT seq
2877 nt
NT seq
+upstream
nt +downstream
nt
atggaggaccacgtgttcctcacgtgcgaccaccctctcaaccttccaacactttcaacc
aacgaacctctctctctcgaagccctagcttccctgaggtctctgatcatcaacccctca
actaccgcgcccacaatctcttccgtcatcgaaaccctaactcgctcgctccaactcagt
cgcgaccccctcgccattcaccacactctcaagctcctcactgacatggccttgcgactc
ccccacctctcaggcgtcgtcttcgactcggtctgttcccactcgctcctttccaccgat
tcgacccgcgtcgccgccgaatctctcgacgcactcgcttctatcgcggagggcaaccga
gtcctagctcccggcattgaagaattggacgaccgtttattcgcctcgctctgtttcagt
ccatctctttccgtacggccatggcttctcagaaacgccgacaggtttggtgtacagcct
catttgttattcactctgtttctagggtttacgaaagatccatatccgtatgtgaggaaa
gttgctttggacggacttgttgacttgagcaagaatggtgttattgaggaccctgacatg
atcgaagggtgctacttccgtgcagttgagcttctaaacgacatggaagattgcgttaga
tcggctgcagttcgcacggtgtgtgcttggggtctaatgctggtggcgtgcaagtcggag
acgaaggcatattggtctgatgaagtatttgtcaaactttgttcaacggtgagagacatg
agcatggaggttagagttgaagctttttgtgcccttgggaagatagaaatggtatctgag
gaaattcttttgcaaaccctgtcaaagaaagttctagtgaccatgaagggaaagaaatct
cttgctcagtgctctgatgaacaactagaaacatcagggtcaagtgttgctggagctttc
atgcatgggcttgaggatgaattccatgaggtgcgaaaagctgcatgtcattctctgcgt
acactgaccatactctgtgccaagtttgctggagaagccttaaacttactgattgatgta
ctgaatgatgactcaattcttgtccggctacaagcttttgaaactatgcatcgaatggca
tcctttgactgtctgacagtgcaagaaacacacatgcatatgtttcttggcactctggtt
gacaatgataccctcataagatcttcagcaaggaaaatacttaaattggcaaagctgcaa
aagttgaagttgtttagattaactattgatgcccttctagaaaatttggaaagacatcca
caggatgaagcagatgtattatctgttttgtttcatattggacgaaatcatggaaagttt
gtggtccgcataattgaggaggtttttccgcagatggagccaatgtctaatggcaagttg
ggctttgatagtgtgagagtggccgccttgctagttctggccatatcagctccactttca
catgagcgtgattgcaatattccacctacaatattttcttatgcagttacatacctggga
aggatttctcaggctttgagtgaccttatgaatcaaaatagccttttggattacttgtct
cagtgcagtagatcctcaggaccgtatgccatagagttcaacttcaaagtcggggagcct
tgcttgcctaatgctaatgttccaacctatacgagtaatgagataattggttccattgca
atgccattgccccaaaagacaggtggaacctctgaaattttgtctccaacaataaagaag
ccaagggaagcaggaactttacttgtagaataccagctagacgtgcatgatgaagttacc
aagtcaatgaatgttattcttgcaaaggtgaaggatatctggccatttgtactgtcagga
tttacgaatgaagtactgaggactttgagaagttgcagggaggagttggcaacatttact
tctgactcgcatgcatctgctggtgtattttcctttacgaagcaatatatccagatagtg
aaactgcttacaaaggcatgggtgaacttcctgtcttcaacacattttccttgtggaatg
ggagaattggacttagtattgggaaagctggacaggaggcttagagatctgaagagtgcg
tttataagattgtctgaagaggaggagttacatatcttggagctgatacttgtgacttgt
atgctcagattgtctaaagtggaaatttgctgtcatcttggaaccttgacaaagctctct
agtatgatgtcacgggtggaatatctccttagagatggatctgttgaaccatccaggttt
ataattgaggtcggaaaattatcatccgaatttggttcttcttctctcaatgaagcttcc
tttaacccccttctcattagaagggtacttgaaagcttctccctcaagcaacttgtgttg
tgtggtagactcaagcacatgaaggcagagctggatatacctgacaatgagtacgaaaat
cctcttcggtttgttgcgggactgccggttggtataccatgccgtatcactcttcataac
atttcagctgaaagtaggttgtggctgaaaatgactgtaaataaagacaacgaatcaact
cagttcgtcttcttggatttaaaccattttggaggctgtgatgatgtcagagtatttatg
tttaccgcacccttttacaaaaccccaaaagcattttcttttacgattagggtctgtatt
tgtatggaatgtttgtctgaggttgaggatgtttcttctgtcaaacgttggggtccaaga
catgagcttacatatctttgccgggaaaaggatgtttatctttctatggttaagtaa
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