KEGG   Prunus dulcis (almond): 117638744
Entry
117638744         CDS       T07328                                 
Name
(RefSeq) ABC transporter I family member 21
  KO
K12608  CCR4-NOT complex subunit CAF16
Organism
pdul  Prunus dulcis (almond)
Pathway
pdul03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:pdul00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    117638744
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pdul03019]
    117638744
Messenger RNA biogenesis [BR:pdul03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Ccr4-NOT complex
     117638744
SSDB
Motif
Pfam: ABC_tran AAA_21 AAA_29 ORC-CDC6-like nSTAND3 NACHT AAA_28 AAA AAA_15 AAA_23 SMC_N AAA_18 AAA_22 PduV-EutP Zeta_toxin AAA_25 AAA_5 SRP54 AAA_24 Arf AAA_30 AAA_33 AAA_14 VapE-like_dom AAA_7 ATP-synt_ab
Other DBs
NCBI-GeneID: 117638744
NCBI-ProteinID: XP_034229741
LinkDB
Position
8:complement(17900774..17903481)
AA seq 301 aa
MAGRVSETSNPRAEGEGETSSGIRVHGMQFSYDAQPPLFCDFNLNIAPGSRCLLVGANGS
GKTTLLKILAGKQMVGGRDVVRVLNCSAFHDTHLVCSGDLAYLGGSWSKSVGSAGELPLQ
GDFSAEHMIFGVEGTDPVRRDKLIELLDINLQWRMHKVSDGQRRRVQICMGLLHPFKVLL
LDEVTVDLDVVARLDLLDFFKEECDQRGATIVYATHIFDGLETWATHLAYIQDGELKRAE
KLSEVNELKSSANLLSVVESWLRAETKHEKKRSTNPPAQTQKTSPFATSPFMSSRHMAYY
R
NT seq 906 nt   +upstreamnt  +downstreamnt
atggcgggcagggtcagtgaaacctccaatccgagagcggaaggagaaggagagacgtcg
agcggtattagagtccatggcatgcaattctcgtacgatgcacaacccccgcttttctgc
gatttcaaccttaacatagcccccggatcgcgatgccttctcgtcggcgccaacggatct
ggcaagaccactttgctgaagattctagcagggaagcagatggtgggagggagagatgtg
gtgcgggttttaaattgttcggcttttcatgacactcatttggtttgcagcggcgattta
gcttacttgggaggctcgtggagtaaatctgttggctctgctggagaacttccattgcag
ggagatttctcagctgaacatatgatatttggagttgaagggactgatccagttaggaga
gacaagttgattgagctgcttgatataaacctccagtggcgaatgcataaagtatctgat
gggcaacgacgtcgagtccaaatctgcatggggcttcttcatcctttcaaggttctcttg
cttgatgaggtaacggtcgacttggatgttgttgcgagactggacttattagatttcttc
aaggaagaatgtgatcagagaggagcgacaattgtttatgcaacccatatttttgatggg
ttggagacatgggcaacccatctggcttacatccaagatggtgagctaaagagggctgag
aagttatcggaggtcaatgagttgaagagttcggccaatctgctctctgttgttgagtcc
tggcttcgtgctgaaaccaagcatgagaaaaagagatccacaaatcctcctgcccaaact
caaaagacctctccttttgctacttctccatttatgtcttcaagacacatggcatattac
cgctga

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