Pseudonocardia dioxanivorans: Psed_5115
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Entry
Psed_5115 CDS
T01479
Name
(GenBank) 2-oxoglutarate dehydrogenase, E1 subunit
KO
K01616
multifunctional 2-oxoglutarate metabolism enzyme [EC:
2.2.1.5
4.1.1.71
1.2.4.2
2.3.1.61
]
Organism
pdx
Pseudonocardia dioxanivorans
Pathway
pdx00020
Citrate cycle (TCA cycle)
pdx00630
Glyoxylate and dicarboxylate metabolism
pdx00785
Lipoic acid metabolism
pdx01100
Metabolic pathways
pdx01110
Biosynthesis of secondary metabolites
pdx01120
Microbial metabolism in diverse environments
pdx01200
Carbon metabolism
pdx01210
2-Oxocarboxylic acid metabolism
Module
pdx_M00009
Citrate cycle (TCA cycle, Krebs cycle)
pdx_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
pdx00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
Psed_5115
00630 Glyoxylate and dicarboxylate metabolism
Psed_5115
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
Psed_5115
Enzymes [BR:
pdx01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.2 oxoglutarate dehydrogenase (succinyl-transferring)
Psed_5115
2. Transferases
2.2 Transferring aldehyde or ketonic groups
2.2.1 Transketolases and transaldolases
2.2.1.5 2-hydroxy-3-oxoadipate synthase
Psed_5115
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.61 dihydrolipoyllysine-residue succinyltransferase
Psed_5115
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.71 2-oxoglutarate decarboxylase
Psed_5115
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
E1_dh
2-oxoacid_dh
OxoGdeHyase_C
Transket_pyr
2-oxogl_dehyd_N
Motif
Other DBs
NCBI-ProteinID:
AEA27252
UniProt:
F4CQ56
LinkDB
All DBs
Position
5478383..5482174
Genome browser
AA seq
1263 aa
AA seq
DB search
MSTSSTSGQTSQFGPNEWLVEEMYQRFLDDPDAVDAAWHDFFADYRPPSGDDETESNGTT
STTTTPTASASAAAPRSAAASGTAAANGSAPAPEDKAEKTTEKTVQQPATQKPAQQADRS
ANGAAPGKPVAGTTSRAAKPAPAAAEGEVLPLRGAANAVVKNMNASLAVPTATSVRAVPA
KLIADNRIVINNQLKRTRGGKLSFTHLIGYAVVKALADFPVMNRHFVEVDGKPTAVQPEH
VNLGLAIDLQGKNGQRSLVVVSIKGCEEMTFAQFWSAYESMVHKARNGTLAAEDFAGTTI
SLTNPGTLGTNHSVPRLMQGQGTIVGVGAMEYPAEFQGASEERLAELGISKIITLTSTYD
HRIIQGAESGDFLRRVHHLLLGGDGFFDDIFRSLRVPYEPIRWVQDFAEGEVDKTARVLE
LIESYRTRGHLMADTDPLNYRQRRHPDLDVLSHGLTLWDLDREFAVGGFAGQLRMKLRDV
LGVLRDAYCRTIGTEYMHIADPEQRAWLQERIEVPHQKPPVVEQKYILSKLNAAEAFETF
LQTKYVGQKRFSLEGGETVIPLLDAVLDKAAEHELAEVVIGMPHRGRLNVLANIVGKPIS
QIFREFEGNLDPGQAHGSGDVKYHLGAEGKYFRMFGDGETVVSLASNPSHLEAVDPVLEG
IVRAKQDLLDQGDGAFPVLPLMLHGDAAFAGQGVVAETLNLALLRGYRTGGTVHVVVNNQ
VGFTTAPEQSRSSQYCTDVAKMIGAPVFHVNGDDPEACVWVAKLAVEYRERWNNDVVIDM
ICYRRRGHNEGDDPSMTQPAMYDVIDAKRSVRKIYTESLIGRGDITVDEAEAALKDFSNQ
LEHVFNEVRELERTPPTLSPSVENEQSVPTDLDTSVPLEVIHRIGDAHVQLPEGFTVHQR
VKPVLAKREKMSREGDVDWAFGELLAMGSLALNGKLVRLSGQDSRRGTFVQRHSVVIDRK
TGEEYFPLRNLAEDQGRFLPYDSALSEYAALGFEYGYSVANPDALVMWEAQFGDFVNGAQ
SIIDEFISSGEAKWGQMADVVLLLPHGLEGQGPDHSSGRIERFLQLCAEGSMTVAMPSEP
ANHFHLLRRHALDGVRRPLVVFTPKWMLRAKQVVSPLSDFTGGRFRTVIDDPRFRNSDSP
APGVRRVLLCSGKIYWELAAAMEKRGGRDDIAIVRIEQLYPVPDRQLAAVLERYPNADDI
RWVQEEPANQGAWPFFGLDLREKLPERLSGLTRVSRRRMAAPAAGSSKVHEVEQAAILDE
ALS
NT seq
3792 nt
NT seq
+upstream
nt +downstream
nt
gtgtccaccagcagtacctccggccagacgagccagttcggccccaacgaatggctcgtc
gaggagatgtaccagcgtttcctcgacgacccggatgccgtcgacgccgcctggcacgac
ttcttcgccgactaccggccgccgtccggtgacgacgagacggagtcgaacggaaccacc
tccaccacgacgaccccgaccgcctccgcgtccgccgccgctccccgttccgccgccgcc
tccgggacggccgcggcgaacggctcggcgccggcccccgaggacaaggcggagaagacc
accgagaagaccgtgcagcagcccgccacgcagaagccggcccagcaggccgaccggtcg
gcgaacggcgccgcccccggcaagcccgtcgcgggcaccacgtcgcgtgccgccaagccc
gcgcccgccgccgccgagggcgaggtgctgcccctgcgcggggcggcgaacgccgtcgtc
aagaacatgaacgcctcgctcgccgtgccgaccgcgacgagcgtgcgcgccgtgccggcg
aagctcatcgccgacaaccgcatcgtcatcaacaaccagctcaagcgcacgcgtggcggc
aagctgtcgttcacccacctcatcggctacgcggtggtcaaggcgctggccgacttcccg
gtgatgaaccggcacttcgtcgaggtcgacgggaagcccaccgccgtccagccggagcac
gtcaacctcggcctcgcgatcgacctgcagggcaagaacgggcagcgttccctcgtcgtc
gtgtcgatcaagggctgcgaggagatgaccttcgcgcagttctggtccgcctacgagagc
atggtccacaaggcgcgcaacggcacgctcgccgccgaggacttcgcgggcaccacgatc
agcctcaccaacccgggcaccctcggcaccaaccactcggtgccgcggttgatgcagggc
cagggcacgatcgtcggtgtcggcgcgatggagtaccccgccgagttccagggcgccagc
gaggagcggctcgccgagctcggcatcagcaagatcatcacgctgacgtcgacctacgac
caccggatcatccagggcgcggagtcgggcgacttcctgcgccgggtccaccacctgctg
ctgggcggcgacgggttcttcgacgacatcttccgctccctgcgcgtcccgtacgagccg
atccgctgggtgcaggacttcgccgagggcgaggtcgacaagaccgcgcgcgtcctcgag
ctgatcgagtcctaccgcacgcgcggccacctgatggccgacaccgacccgctcaactac
cgccagcgccgtcaccccgacctcgacgtgctcagccacgggctgacgctgtgggacctc
gaccgcgagttcgcggtcggcggcttcgcgggccagctgcggatgaagctgcgcgacgtg
ctcggtgtgctgcgcgacgcgtactgccgcaccatcggcaccgagtacatgcacatcgcc
gacccggagcagcgggcctggctgcaggagcgcatcgaggtcccgcaccagaagccgccg
gtcgtcgagcagaagtacatcctgtcgaagctcaacgccgccgaggcgttcgagaccttc
ctgcagacgaagtacgtcgggcagaagcggttctccctggagggcggcgagaccgtcatc
ccgctgctcgacgccgtgctggacaaggctgccgagcacgagctcgccgaggtcgtcatc
ggcatgccgcaccgcggccggctcaacgtgctggccaacatcgtcggcaagccgatcagc
cagatcttccgcgagttcgagggcaacctcgacccgggccaggcccacggctccggcgac
gtcaagtaccacctcggcgccgagggcaagtacttccgcatgttcggcgacggcgagacg
gtcgtgtcgctggcgtccaacccgagccacctcgaggccgtcgaccccgtgctcgagggg
atcgtccgggccaagcaggacctgctcgaccagggcgacggcgccttcccggtgctgccc
ctgatgctgcacggcgacgccgcgttcgccgggcagggcgtcgtggccgagacgctgaac
ctcgccctgctgcgcggctaccgcaccggcggcaccgtgcacgtcgtcgtcaacaaccag
gtcgggttcaccaccgcgcccgagcagtcgcgctcgtcgcagtactgcaccgacgtcgcg
aagatgatcggcgcgccggtcttccacgtgaacggcgacgaccccgaggcgtgcgtgtgg
gtcgccaagctggcggtcgagtaccgcgagcgctggaacaacgacgtcgtgatcgacatg
atctgctaccggcgccgcggccacaacgagggcgacgacccctcgatgacgcagccggcg
atgtacgacgtcatcgacgccaagcgcagcgtccgcaagatctacaccgagtccctgatc
ggccgcggcgacatcaccgtcgacgaggccgaggccgcgctgaaggacttctccaaccag
ctcgagcacgtgttcaacgaggtccgcgagctggagcgcacgccgccgacgctctcgccc
tcggtcgagaacgagcagtcggtgcccaccgacctcgacacctcggtgccgctggaggtc
atccaccgcatcggcgacgcccacgtgcagctgccggaaggcttcaccgtgcaccagcgg
gtcaagccggtgctggccaagcgggagaagatgtcgcgcgagggcgacgtcgactgggcc
ttcggcgagctgctcgccatgggctcgctggcgctcaacggcaagctggtccggctctcc
gggcaggactcgcggcgcggcacgttcgtgcagcggcactcggtcgtcatcgaccgcaag
accggcgaggagtacttcccgctgcgcaacctcgccgaggaccagggccgcttcctgccc
tacgactcggcgctgtcggagtacgcggcgctcggcttcgagtacggctactccgtggcc
aacccggacgcgctcgtcatgtgggaggcgcagttcggcgacttcgtcaacggcgcccag
tcgatcatcgacgagttcatctcctccggtgaggccaagtgggggcagatggccgacgtc
gtgctgctgctgccgcacggcctcgagggccagggccccgaccacagctccggacgcatc
gagcggttcctgcagctgtgtgccgaggggtcgatgacggtcgcgatgccgtcggagccc
gcgaaccacttccacctgctgcgccggcacgccctcgacggggtgcgccgcccgctggtg
gtgttcacgccgaagtggatgctgcgcgccaagcaggtcgtcagcccgctgtcggacttc
accggtggccgcttccgcaccgtgatcgacgacccgcgcttccgcaactccgacagcccc
gcccccggggtgcgccgggtgctgctgtgctcgggcaagatctactgggagctggcggcg
gcgatggagaagcgcggcgggcgcgacgacatcgcgatcgtccgcatcgagcagctctac
ccggtgcccgaccgccagctcgccgcggtcctcgagcgctaccccaacgccgacgacatc
cgctgggtccaggaggagccggccaaccagggcgcgtggccgttcttcggcctcgacctg
cgggagaagctcccggagcggctctcgggcctgacccgcgtgtcgcggcgccggatggcc
gcgcccgcggccggctcgtcgaaggtccacgaggtcgagcaggccgcgatcctcgacgag
gcgctgagctga
DBGET
integrated database retrieval system
