Pseudonocardia dioxanivorans: Psed_6410
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Entry
Psed_6410 CDS
T01479
Name
(GenBank) peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin
KO
K07260
zinc D-Ala-D-Ala carboxypeptidase [EC:
3.4.17.14
]
Organism
pdx
Pseudonocardia dioxanivorans
Pathway
pdx00550
Peptidoglycan biosynthesis
pdx01100
Metabolic pathways
pdx01502
Vancomycin resistance
pdx02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pdx00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Psed_6410
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Psed_6410
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
Psed_6410
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pdx01002
]
Psed_6410
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pdx01011
]
Psed_6410
09183 Protein families: signaling and cellular processes
01504 Antimicrobial resistance genes [BR:
pdx01504
]
Psed_6410
Enzymes [BR:
pdx01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.17 Metallocarboxypeptidases
3.4.17.14 zinc D-Ala-D-Ala carboxypeptidase
Psed_6410
Peptidases and inhibitors [BR:
pdx01002
]
Metallo peptidases
Family M15: zinc D-Ala-D-Ala carboxypeptidase family
Psed_6410
Peptidoglycan biosynthesis and degradation proteins [BR:
pdx01011
]
Peptidoglycan biosynthesis and degradation
Carboxypeptidase
Psed_6410
Antimicrobial resistance genes [BR:
pdx01504
]
Gene sets
Vancomycin resistance modules
Vancomycin resistance, D-Ala-D-Lac type [MD:
M00651
]
Psed_6410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VanY
Motif
Other DBs
NCBI-ProteinID:
AEA28504
UniProt:
F4CTK1
LinkDB
All DBs
Position
complement(6776778..6777437)
Genome browser
AA seq
219 aa
AA seq
DB search
MTYPGPARTSERPPRPGTVTAAILVVVVVVLGVVSLVVTDGAASDASARPSRATGPVADV
PRGSPPDAAADEDDGVVPDGTTIFDDVPAVARLDPGLLASVRRAAADAGRSGIGFSVNSG
WRSPRYQEQLLREAVATYGSEREAARWVATADTSPHVSGDAVDIGPAESAAWLSAHGAGY
GLCRVYRNEPWHFELRPAAVHSGCPPLYADPTDDPRMRE
NT seq
660 nt
NT seq
+upstream
nt +downstream
nt
atgacctaccccggacccgcacgaacatccgagcgcccaccccggccggggaccgtcacc
gcggccatcctcgtcgtcgtggtggtcgtcctcggtgtcgtgtcgctggtcgtgaccgac
ggcgccgcgtccgatgcgtccgcgcgaccgtcgcgtgccaccggccccgtggccgacgtc
ccgcgcgggtcccctccggacgcggccgccgacgaggacgacggcgtcgtccccgacggc
acgacgatcttcgacgacgtaccggcggtcgcgaggctcgatccggggctgctcgcgtcc
gtccggcgggcggcggcggacgccgggcgcagcgggatcgggttctccgtcaacagcggc
tggcgttcaccgcggtaccaggagcagctgctgcgcgaggccgtcgccacgtacggttcc
gaacgggaggccgcgcggtgggtcgccaccgcggacacctcgccgcacgtgtcgggcgac
gccgtcgacatcggcccggccgagtccgcggcatggctgtccgcgcacggcgccgggtac
gggctgtgccgggtctatcgcaacgagccgtggcacttcgagctgcgtcccgccgccgtc
cacagtggctgcccgccgctctacgccgaccccacggacgacccgaggatgcgggaatga
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