Paenibacillus dendritiformis: QJQ58_04570
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Entry
QJQ58_04570 CDS
T09074
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
pdy
Paenibacillus dendritiformis
Pathway
pdy03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pdy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
QJQ58_04570 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pdy03400
]
QJQ58_04570 (nth)
Enzymes [BR:
pdy01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
QJQ58_04570 (nth)
DNA repair and recombination proteins [BR:
pdy03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
QJQ58_04570 (nth)
Prokaryotic type
QJQ58_04570 (nth)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
HHH_8
EndIII_4Fe-2S
RecR_HhH
ZT_dimer
HHH_5
Motif
Other DBs
NCBI-ProteinID:
WGU95549
LinkDB
All DBs
Position
1004926..1005594
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AA seq
222 aa
AA seq
DB search
MATSARVRRILDTIASMYPDAHCELIHSNPFELTIAVLLSAQCTDETVNKVTADLFRKYK
RPEDYLAVPLEELQADIRRIGLYRNKASNIQKLCRMLLDKYDGEVPREHAQLTELPGVGR
KTANVVVSNAFGVPAIAVDTHVERVAKRLKLADEQDSVLEVEKKLMRKVPRDEWTLTHHR
LIFFGRYHCKAQSPRCEICPLIDCCRVGKARMKATKPRKTGK
NT seq
669 nt
NT seq
+upstream
nt +downstream
nt
ttggcaaccagtgcacgtgtacgccgaatattggacacgatcgccagcatgtatccggat
gcgcattgcgagttgatccattccaatccgttcgaattgacgattgccgttctgttgtcg
gcccaatgcacggacgagaccgtcaataaggtaaccgcggacttgttccggaagtataag
cgtcccgaggattatttggcggtaccgctggaggaactgcaggcggacatccggcgcatc
gggctgtaccgcaacaaggcaagcaatatccagaagctgtgccgcatgctgctcgacaag
tatgacggcgaggtgccccgggaacatgcccaattaaccgagcttcccggcgtcgggcgc
aagacggcgaatgtcgtcgtctccaatgcgttcggcgtgccggcgatcgcggtcgatacg
catgtggaacgggtagccaagcgcttgaagctggccgatgaacaggacagcgtgctggaa
gtggagaagaagctgatgcgcaaagttccgcgggacgaatggacgcttacgcatcatcgg
cttatattttttggacgttatcattgcaaagcgcagtcgccccggtgcgagatttgtcct
ctcatcgattgctgccgcgtgggaaaagcacgtatgaaagcgaccaaaccaagaaagact
ggaaaataa
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