Phytobacter diazotrophicus: HHA33_19340
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Entry
HHA33_19340 CDS
T06586
Symbol
rlmC
Name
(GenBank) 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC
KO
K03212
23S rRNA (uracil747-C5)-methyltransferase [EC:
2.1.1.189
]
Organism
pdz
Phytobacter diazotrophicus
Brite
KEGG Orthology (KO) [BR:
pdz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pdz03009
]
HHA33_19340 (rlmC)
Enzymes [BR:
pdz01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.189 23S rRNA (uracil747-C5)-methyltransferase
HHA33_19340 (rlmC)
Ribosome biogenesis [BR:
pdz03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
HHA33_19340 (rlmC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
MTS
Methyltransf_25
Methyltransf_15
Methyltransf_11
Cons_hypoth95
Methyltransf_12
Motif
Other DBs
NCBI-ProteinID:
QJF18569
LinkDB
All DBs
Position
complement(4053505..4054641)
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AA seq
378 aa
AA seq
DB search
MQCALFDARRCHSCQWIEQPTGDQLCAKMTDLRTLLADLPVTEWCAPVSGPEQGFRNKAK
MVVSGSVEKPLLGMLHRDGTPEDLTDCPLYPASFQAVFAVLKPFIARAGLTPYNVARKRG
ELKYLLLTESQHTGGMMLRFVLRSQTKLEQLRAALPWLQAQLPQLRVISVNIQPVHMAIM
EGETEIFLTEQQALAENFNGVPLWIRPQSFFQTNPVVASALYATAREWVRALPVRHMWDL
FCGVGGFGLHCATPEMTLTGIEIAPEAIACAKQSAAELGLTDLHFQALDSTRFATAQTDA
PQLVLVNPPRRGIGQALCDYLNRMAPPYIVYSSCNARTMAADLHALEGYRVERVQLFDMF
PHTAHYEVLTLLVKCSTV
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atgcagtgcgcactctttgacgccaggcgctgtcactcctgtcagtggattgaacaaccg
actggcgaccaactctgtgcaaaaatgaccgatctccgcaccttgctggcggatttgccg
gtgacagaatggtgtgcgccggttagcggcccggaacaggggtttcgtaataaagccaag
atggtggtgagcggcagcgtggagaaaccgctgctcggcatgttgcatcgcgacggtacc
cccgaagatttgaccgattgcccgctttatcccgcctcgtttcaggcggttttcgccgtc
cttaaaccttttatcgctcgtgcgggcttaacgccctacaacgtggcgcgtaaacgcggt
gagctgaaatacctgctattaaccgaaagccagcacacgggcggcatgatgctgcgtttt
gtgctgcgttcacagaccaagcttgagcagcttcgtgccgcgctgccgtggttacaggcg
caattgccgcagcttcgcgtcatttcagtcaatatccagccggtgcacatggccattatg
gaaggggagacggaaatcttcctgactgagcagcaggcgctggcggaaaatttcaacggc
gtgccgttgtggatccgtccacagagtttctttcaaaccaatccggtcgtcgccagtgcg
ctgtacgctacggcgcgtgagtgggtaagggcgctgccggtacgccatatgtgggatctg
ttttgcggtgtcggcggttttggtctgcattgtgcaaccccggagatgacgctcaccggt
atcgaaatcgccccggaggcgattgcctgcgcgaagcagtccgcggctgagctggggctg
accgatttgcactttcaggcgctggactccacccggttcgcgaccgcccagacggatgcg
ccacaactggtgctggtaaacccgccgcgtcgtggaattggccaggcgctttgcgattat
ctgaaccggatggcgccgccgtatatcgtctattcaagctgtaatgcccgcacgatggcg
gcagacttacacgcgctggagggctatcgcgtggagcgtgtacaactgtttgatatgttc
ccccacacggcgcattacgaagtgctgacactgctggtgaaatgttctacggtttaa
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