Phytobacter diazotrophicus: HHA33_23785
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Entry
HHA33_23785 CDS
T06586
Symbol
lpxC
Name
(GenBank) UDP-3-O-acyl-N-acetylglucosamine deacetylase
KO
K02535
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:
3.5.1.108
]
Organism
pdz
Phytobacter diazotrophicus
Pathway
pdz00540
Lipopolysaccharide biosynthesis
pdz01100
Metabolic pathways
Module
pdz_M00060
KDO2-lipid A biosynthesis, Raetz pathway, LpxL-LpxM type
Brite
KEGG Orthology (KO) [BR:
pdz00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
HHA33_23785 (lpxC)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
pdz01005
]
HHA33_23785 (lpxC)
Enzymes [BR:
pdz01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.108 UDP-3-O-acyl-N-acetylglucosamine deacetylase
HHA33_23785 (lpxC)
Lipopolysaccharide biosynthesis proteins [BR:
pdz01005
]
Lipid A
HHA33_23785 (lpxC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LpxC
Motif
Other DBs
NCBI-ProteinID:
QJF19378
LinkDB
All DBs
Position
complement(5019298..5020215)
Genome browser
AA seq
305 aa
AA seq
DB search
MIKQRTLKRIVQATGVGLHTGKKVTLTLRPAPANTGVIYRRTDLNPPVDFPADAKSVRDT
MLCTCLVNEHDVRISTVEHLNAALAGLGIDNIIVEVDAPEIPIMDGSAAPFVYLLLDAGI
EELRSAKKFVRIKETVRVEDGDKWAEFKPFNGFSLDFTIDFNHPAIDASTQRYAMNFSAD
AFMRQISRARTFGFMRDIEYLQSRGLCLGGSFDCAIVVDDYRVLNEDGLRFEDEFVRHKM
LDAIGDLFMCGHNIIGAFTAYKSGHALNNKLLQAVLAKQEAWEFVTFEDDAELPLAFKAP
TMVLA
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgatcaaacaaaggacacttaaacgtatcgttcaggcgactggtgtcggtttacatacc
ggcaagaaagtcacactgacgttgcgccctgcgccggccaacaccggggtcatctatcgt
cgcactgacttgaatccaccggtagatttcccggctgatgctaaatctgtgcgtgataca
atgctctgtacgtgtctggtgaacgagcatgacgtgcggatttcaaccgtagagcacctt
aatgctgctctggccggtctgggtatcgacaacattattgttgaagtcgatgcgccggaa
atcccgattatggatggtagtgctgcaccgttcgtttatcttctgctggacgcaggcatc
gaagagctgcgcagtgcgaagaaattcgtgcgaatcaaagagacggtccgcgttgaagac
ggtgataaatgggcagagtttaaaccgtttaacggtttctctctcgatttcaccatcgac
tttaaccacccggccattgatgccagcacccagcgttacgcgatgaacttttctgccgac
gcgtttatgcgccagattagccgcgcgcgtaccttcggtttcatgcgtgatatcgaatat
ctgcagtcccgtggtttgtgcctgggcggtagcttcgattgtgccatcgttgttgacgat
tatcgcgtattgaacgaagacggcctgcgttttgaagacgaattcgttcgtcacaaaatg
ctcgacgcgattggtgacttgttcatgtgtggtcacaatatcatcggtgcgtttaccgca
tataaatctggtcacgcgctgaacaacaaactgttgcaggcggtcctggcgaaacaggaa
gcctgggaatttgtgaccttcgaagacgatgcggaactgccattggcgttcaaagcaccg
acgatggttctggcgtaa
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