Primulina eburnea: 140816921
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Entry
140816921 CDS
T11060
Name
(RefSeq) structural maintenance of chromosomes flexible hinge domain-containing protein GMI1 isoform X1
KO
K23113
structural maintenance of chromosomes flexible hinge domain-containing protein 1
Organism
pebu Primulina eburnea
Brite
KEGG Orthology (KO) [BR:
pebu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pebu03036
]
140816921
03400 DNA repair and recombination proteins [BR:
pebu03400
]
140816921
Chromosome and associated proteins [BR:
pebu03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
140816921
DNA repair and recombination proteins [BR:
pebu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Other NHEJ factors
140816921
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HATPase_c_3
SMCHD1_S5
HATPase_c
Motif
Other DBs
NCBI-GeneID:
140816921
NCBI-ProteinID:
XP_073032528
LinkDB
All DBs
Position
16:28282251..28297211
Genome browser
AA seq
1616 aa
AA seq
DB search
MFSKTPPSNLGKRPNEEPSRERPRKILFGGVKVESDAHLANKLFWFRILLPNGTTLELKM
TELRSHMPIEEFIAAVKREYFNTVPRTGSGQLETRINWTYADLHFTDADGNKMRTEVKFR
DLLPNKWHILALNDGSAEPEAYEDMWDLTPDTDLLKELPDEYTFETALADLIDNSLQAVW
SNHPGEKRLISVYLRKNRISIFDTGPGMDGANEKIVKWGKMGASMHREEREQGIGGKPPY
LMPFFGMFGYGGPVATMFLGRHAVVSSKTKTCNKVFTLHLERDALISPSRTENRWKTKGG
MRDPLDDEMSKSCHRSFTKVEILEPKRSTLDVKKLQCKLKDIYFPYVQCDEMSGKTSRPI
EFRVNGVDLTEIEGGEVAITNMHSCNGPEFTLQLHFSFSDDASSPSCQRKNGFLDANARL
RCVYFPVIKGEESITRIITKLEADGFEIRESFENYSRVSVRRLGRLLPDTRWTWLPFMEP
KAKKGEKAQNLKRCRYRVKCFIETDSGFNPTPTKTDLAHHHPYTHALKNFGSGTPVNGKE
LQIEIWRDGKKLTLTTLEKQYSDWISEMHDLYDDEIESGLDQPTILISPKNKKLGISSDV
IRVHKEIERRRTCWKAGQRMKILKGACAGFHKNNVFATLEYIILEGLSGDPCGEARLICR
PLGLPKAKGCRLSDNGNNVLDIGESLSLSISVIDSQKCIAVSDIEWNSQLEKHRQKLPSG
IDLLSLEECQELEIGGGFPTNIIEAGDAFPQKIVAVVRPKVFDSASSTKRLDQKFIVREN
FEMILEVNFRVEESAKSDHIYSVRIKPSSHKGLQGLYIFLLSSKIEKFQKAGYYTFLFSL
ADVKDVHFQKAVQVQALAEICSWRLENHNQNSQCTIRVGCRTPSISIACYDRYNNRLPFT
STPRPTIKLIKGSHVLAQVRHMKVTADKSVMTIKDIVVECHDLDKIRPKYEAYLKISSVD
KALSVNCPCQVLPGSPKKITTHPPKLRKQLLPGQIIEELVLEVFDEYGNHVEKDENILLR
VDGFSFLHGSSAVRNVVTDCNKMVDARGYVDLSDVLKVSKGYGKDVSLSVISKDKVIFKM
EFQTERRELRTDSKIFKYCEAGSELENILFEIVDADGVVDENINDNEKHGQIHTLILKSD
SMDVDNFVRYSFSRGRSTVRSIHLPQREGIFTLTAFHSHYPDLKVDIEVHVQNDQGENLE
LADHEDYRDPEIFPEASFRNALPLPRTPVLDVPDIEPVNVSPQSLKENIVHSDYSSCLKN
PNLEHQNAQNENSGDRGNFAGNSLICLKELEDDLSNCGLTIGKHESDLKMLKQKQSTLQQ
HISDLQALVIELDAPSTFGKECIEQKIESRGDSASAFVCKLRKLALEDRPKGVLGVVALL
GSVQTIELSRMLAQYLGEDQMLAIVCENYAAAESFDTRFSSKFGQSSSGRYLTLCLEDTR
TNGYELESDSQNLDSLQEPTLPNGCTPHGFLGYAVRMVNMEAVHSHGTRKNDTSTRQMLL
CCLFGELQVYENKQCMKMARACIRDGAISLDGGIMKRKGLISFGNWEQVTPDVIFPVVNK
MPVSLTSLKASKCMVERESELAEVTREIDKKNTLYKIDMEIFQRSRDRYNLYLSRM
NT seq
4851 nt
NT seq
+upstream
nt +downstream
nt
atgttctcaaaaacacctccgagcaatttgggcaagaggcctaacgaagagcctagtaga
gaaaggcctagaaagattctatttggaggtgtgaaggtcgaaagtgatgcgcatcttgct
aacaaacttttctggttccgcatccttttaccgaatggcacgacccttgagctcaaaatg
accgagcttcgtagtcacatgcccattgaggagtttatcgctgctgtcaaaagagagtac
tttaatacagtcccacgaacagggtctggacaactcgagacaagaattaattggacgtat
gcagatttgcattttacggatgcagatgggaataagatgagaactgaagtgaagtttcgt
gatttgctgcctaataagtggcatatcctcgcgcttaatgatggttcggctgagcctgaa
gcatatgaggatatgtgggatctcacccctgatacggatttattaaaggagctgcctgat
gaatatacatttgaaactgcccttgctgacttgatagataattcattgcaagctgtgtgg
tcaaatcacccaggcgagaaaagattaataagtgtgtacttacgtaaaaacagaatttca
attttcgacacaggaccaggaatggatggagcgaatgagaaaattgtaaagtggggaaaa
atgggagcgtccatgcacagagaagaaagggaacaaggcattgggggaaaacctccatat
ttaatgcctttttttggaatgtttggctatggaggtcctgttgccacgatgtttttagga
aggcatgcggtagtctcatccaagaccaagacctgtaataaagtttttacgttgcacttg
gaaagagatgcattaataagcccttcacgtacagaaaaccggtggaagacaaaaggaggg
atgagagatcctcttgatgatgaaatgagtaaatcctgtcatcgaagcttcacaaaggtt
gaaatactcgagcctaaaagaagtaccctggatgtaaagaaactccagtgcaaattgaaa
gacatttacttcccctatgttcagtgtgacgaaatgtcaggcaagacaagtagacctatt
gaatttcgggtcaatggagttgatttaactgaaatagagggaggggaagtggccataacg
aacatgcattcttgcaacggtccggagttcactctgcaacttcacttcagcttcagcgat
gatgcttcttcaccgagttgtcaaagaaaaaatggatttcttgatgcaaatgcccggttg
aggtgtgtttactttccagtaattaagggagaagagagtattacacgaataattacaaag
ttagaggctgatggatttgaaataagagagagctttgagaattatagcagggtttctgtc
aggcgcttgggtcgtctcttgccagatactcgctggacttggcttccatttatggaacca
aaggcaaaaaaaggcgagaaggcccaaaatctgaaacgatgccgctaccgtgtcaaatgt
tttatagagacagattctggttttaatccaacaccaaccaagacagatttagcccaccat
cacccatacacccatgccttgaagaattttggcagtgggacccctgtaaatggaaaagag
ttgcaaattgaaatctggagagatggaaagaagttgactctcacaacactggaaaaacag
tacagtgattggatttcggaaatgcatgatctctatgatgatgaaattgaaagtggtctg
gatcaacccactattcttatttctccaaagaataaaaagcttggcatatcttcggatgtt
attagggttcataaagagattgagagaagaaggacatgctggaaggcaggacagaggatg
aaaatattaaaaggggcatgtgctggatttcataaaaacaatgtatttgctacactagag
tacataatccttgaagggctttcaggggatccttgtggcgaggctcgactgatttgcagg
ccacttggtctacctaaagcaaaaggttgtcgtctatcagacaatggaaacaatgtccta
gacattggcgagtctctatcgttatcaattagtgtgattgactcacaaaagtgcatagct
gtcagtgatattgagtggaatagccaacttgagaaacatagacagaaattgccttctggc
attgatctattaagtcttgaagaatgccaagaattggaaattggagggggattccctacc
aatattatagaagctggagatgcattccctcagaaaattgttgctgtagtgcgaccaaag
gtttttgattctgcctccagtactaaaagattggatcaaaagttcattgtcagagaaaat
ttcgagatgattctagaagtcaacttcagagtcgaagagagtgccaaaagtgatcatatt
tattctgtgaggattaaaccctcatctcacaaggggttacaaggcttgtacatatttctt
ttgagttcaaaaattgaaaagtttcagaaagctggctactatacattcttattctcactg
gccgatgtgaaggatgtacattttcaaaaagcagtgcaagttcaggcattggctgaaatt
tgcagttggagacttgagaatcataatcagaattcccaatgcacaattagggttggttgt
cgcaccccatctatttccatagcatgctacgatcgatacaataacaggctccctttcact
agcactccacgaccaactatcaaactcattaaaggcagccatgttcttgctcaagtacgt
cacatgaaagtaacagctgataagtcagtcatgacaattaaggacattgttgttgaatgc
catgatttggacaagattcgtccaaaatatgaggcttacttaaaaataagttctgtagac
aaagcactatctgtcaattgtccttgtcaagtccttccaggatcaccaaaaaaaataact
actcatccaccaaaattaagaaaacaattgcttccaggacagattattgaggagctggta
ctcgaagtatttgatgaatatggcaaccacgttgaaaaagatgagaatattttgttgcga
gttgatggattctcatttctgcatggcagcagtgctgtccgcaatgtggttactgattgt
aacaaaatggtagatgccaggggatatgtggacctgagcgatgttcttaaagtttccaag
ggatatggcaaagatgtatctctctctgtgatatccaaagacaaagtcatattcaaaatg
gagtttcaaactgaaagaagagaacttcggacagattcaaagattttcaagtactgtgaa
gcaggttctgaattggagaatattttgtttgaaattgtcgatgctgatggtgttgtggat
gaaaatataaatgataatgagaaacatgggcaaattcatactcttattttaaagtcggac
tcaatggatgtggataattttgtgcgatatagcttctcccgtggacgcagtactgttcgc
tctattcatcttcctcagagagaagggattttcacacttacagcttttcactcccattat
ccagatctgaaagtggatatagaggttcatgttcaaaatgatcagggagagaatcttgaa
ttagcggatcatgaagattacagggatcctgaaatttttcctgaagcttctttcagaaat
gcactgccactccctcggacacctgtcctcgatgttccagatatcgagcctgttaatgtt
tctccacaaagtttgaaggaaaatatagtacattcggattattcgagttgtttaaagaat
ccaaatctggagcatcagaatgcccagaacgaaaattctggggatagaggcaattttgcg
gggaattcattgatttgcttaaaggagcttgaggatgatctttctaactgtgggttgaca
attggaaagcatgaaagtgatttaaagatgctaaaacagaagcagtcaacacttcagcaa
catatatcagatctccaagctcttgtaatagaacttgatgcgccaagcacatttggaaaa
gagtgcattgagcagaaaattgaaagcagaggtgattctgcatcggcttttgtttgcaaa
ttaagaaaactagcattggaagataggccaaagggcgtacttggtgtcgtggctcttctt
ggatcggtacagaccattgagcttagcaggatgttggcacaatatctcggtgaggatcaa
atgctcgcaattgtgtgtgaaaactatgctgctgctgaatcctttgatactcgtttctct
agcaaatttggacaatcttcaagtggaagatatcttactttgtgcctagaggatacaagg
acaaatggctacgagttggaaagtgattcccaaaatctggactccttgcaggagcctacc
ttgccaaatggctgtaccccccacggatttcttggatatgccgttcgcatggtaaacatg
gaagcagtccattcacacgggacaaggaaaaatgatactagtacccgacaaatgttattg
tgctgcctctttggggagcttcaagtttatgagaacaagcagtgtatgaaaatggcacgt
gcctgcattagggatggagccatctctttagacggtggcatcatgaaacgaaagggacta
atatcctttggcaactgggagcaagttacacctgatgtcatatttccagttgtgaacaag
atgcccgtttcgcttacgagtttaaaagcttcgaaatgcatggtagagagggagtcggag
ctagcagaggtaacccgtgagatagataagaagaacacattgtataaaatagatatggaa
attttccaacgttcacgggacaggtataacctttacttgtctcgaatgtaa
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integrated database retrieval system
