Pectobacterium parmentieri SCC3193: W5S_0394
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Entry
W5S_0394 CDS
T02514
Name
(GenBank) Cystathionine beta-lyase
KO
K01760
cysteine-S-conjugate beta-lyase [EC:
4.4.1.13
]
Organism
pec
Pectobacterium parmentieri SCC3193
Pathway
pec00270
Cysteine and methionine metabolism
pec00450
Selenocompound metabolism
pec01100
Metabolic pathways
pec01110
Biosynthesis of secondary metabolites
pec01230
Biosynthesis of amino acids
Module
pec_M00017
Methionine biosynthesis, aspartate => homoserine => methionine
Brite
KEGG Orthology (KO) [BR:
pec00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
W5S_0394
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
W5S_0394
Enzymes [BR:
pec01000
]
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.13 cysteine-S-conjugate beta-lyase
W5S_0394
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Motif
Pfam:
Cys_Met_Meta_PP
Aminotran_5
Met_gamma_lyase
OTCace_N
DUF7361
Motif
Other DBs
NCBI-ProteinID:
AFI88521
UniProt:
A0A0H3HXD2
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All DBs
Position
complement(426237..427427)
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AA seq
396 aa
AA seq
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MTSKKTATALVAAGRSKKFTHGSVNPVIQRASSLVFDTVQDKKHATINRANGALFYGRRG
TLTHFSFQEAMVELEGGAGCALYPCGAAAISNAILSFVAAGDHILVTESAYEPTQDFCTK
VLSKLNVSTTYFDPLIGAGIAELIQPNTKVVFLESPGSITMEVHDVPAIVQAVRRINPEI
VIMIDNTWAAGILFKAFDFDIDISIQAGTKYIVGHSDAMIGTAVANERCWVQLREHSYLM
GQMVDADTAYVASRGLRTLGVRLKQHQESSIRIAKWLAERPEVAVVNHPALPGCKGHEFY
KRDFNGCNGLFSFVLKEKLSKETLAHYLDHFEHFSMAYSWGGFESLILANQPEELAAIRP
VSGVDFTGTLIRLHIGLEDSDDLIDDLTAGFSRLSA
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atgacaagcaaaaaaacggcaaccgcgttagtcgccgcaggacgcagcaagaaattcacc
cacggctccgtaaaccccgttattcaacgcgcttcttctctggtattcgataccgtgcag
gacaagaaacatgccacgattaaccgggccaacggcgcgctgttctacggtcgccgtggc
acgttgacccatttctcgtttcaggaggcgatggtggaactggagggtggcgctggctgt
gcgctgtacccttgtggagcagcagccatctctaacgcaatcctctctttcgttgcggca
ggcgatcatattctggtaacggaatcggcctacgaacccacgcaagatttctgcacgaaa
gtactcagcaagctgaacgtcagcactacctatttcgatccgctcattggtgccggaatt
gccgagctgatccagccgaataccaaagtggtctttcttgaatcaccgggctctatcacc
atggaagtccacgatgtgccggccatcgtccaagccgtgcgccgtatcaatcccgagatc
gttatcatgattgataatacctgggctgcgggcatcttattcaaggcgttcgacttcgat
attgatatctcgattcaggccggtacgaaatatatcgtcggccattccgatgctatgatc
ggcacagcagtcgctaacgaacgctgctgggtacagctacgtgagcactcttacctgatg
gggcaaatggtagatgcagataccgcttatgtcgccagccgcggcctgcgtacattgggc
gttaggctcaaacagcatcaggaaagcagcatccgcatcgcgaagtggctggcggaacgg
ccagaagtggcggtcgttaaccaccccgcgttaccaggatgcaaagggcatgaattctac
aagcgcgattttaacggctgcaacggcttgttctcctttgtgttgaaggagaaattaagc
aaagaaacgttggcacattatctggaccattttgagcatttcagtatggcgtattcctgg
gggggctttgagtccctgattctggcgaatcagccagaagaacttgcagccattcgtcct
gtgagcggcgtggattttaccggtacacttattcggttacatattggacttgaagacagt
gacgatctgatcgacgatctgaccgcaggtttcagcagactgagcgcctaa
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