Pectobacterium parmentieri SCC3193: W5S_1271
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Entry
W5S_1271 CDS
T02514
Name
(GenBank) D-alanine--poly(Phosphoribitol) ligase subunit 1
KO
K03367
D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:
6.1.1.13
]
Organism
pec
Pectobacterium parmentieri SCC3193
Pathway
pec00470
D-Amino acid metabolism
pec00552
Teichoic acid biosynthesis
pec01100
Metabolic pathways
pec01503
Cationic antimicrobial peptide (CAMP) resistance
pec02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pec00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
W5S_1271
09107 Glycan biosynthesis and metabolism
00552 Teichoic acid biosynthesis
W5S_1271
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
W5S_1271
09160 Human Diseases
09175 Drug resistance: antimicrobial
01503 Cationic antimicrobial peptide (CAMP) resistance
W5S_1271
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
01504 Antimicrobial resistance genes [BR:
pec01504
]
W5S_1271
Enzymes [BR:
pec01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.13 D-alanine---poly(phosphoribitol) ligase
W5S_1271
Antimicrobial resistance genes [BR:
pec01504
]
Gene sets
CAMP resistance modules
Cationic antimicrobial peptide (CAMP) resistance, dltABCD operon [MD:
M00725
]
W5S_1271
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Ldh_1_C
Motif
Other DBs
NCBI-ProteinID:
AFI89372
UniProt:
A0A0H3I000
LinkDB
All DBs
Position
1395870..1397303
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AA seq
477 aa
AA seq
DB search
MNLHSELHELQDFLRAALLDPASPNQLAISGSDEAMTWQQLSVAVTDWLHRYQHCQQPAG
SPVVLYGHQQAEFAVAIYSCLLHNIPYIPVDCIYPQERLKEICHLANAPYYYDVATRQFI
ATGEAGQALVEQDLAYIMFTSGSTGKPKGVQIGRESLWHFMKWVREDFSLPDVPVLMNHA
VFSFDLSLIPLLANLATGGHIVLNAKEDIAAENWLDRLKDNGVSVWVSTPSFAYQKLLSP
QFNSEYLPELSVFVFIGEVLNKALVKQLRRRFPHAKILNSYGPTEATVATTVIEITDDIL
HSENDLLPVGAMMPDSRMEITSEGELIIWGKNVMRGYLGLAQENAEKLLHRESEAFRGYR
TGDLGYENGLLYCQGRNDSQIKLNGYRIEINEIENRLLAISDISEAVVLPLMKSGGGVLR
IAAFCVTNLAPEAIKTSLSKVIPPYMVPSQIIIKDALPLNPNGKIDRKLLDTHARTI
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgaaccttcactcagaacttcatgaactacaagatttcctgcgtgcggcattactcgat
cccgctagccccaatcagttggcgattagcggtagcgatgaagcaatgacctggcaacag
ctatctgtcgctgtgactgattggttgcatcgctatcagcattgtcagcagcccgcaggt
tcgccggtggtgttatatgggcatcagcaggcggaatttgctgtagcgatctatagttgc
ctgctgcataacattccgtatatcccggtggactgtatctatccgcaggagcggctcaag
gagatttgccatctggcgaacgccccttactactacgatgttgcgaccagacagtttatt
gcgacgggtgaggcgggtcaggcgctggtcgaacaggatctcgcctatatcatgttcacc
tctggcagtactgggaaaccaaaaggggtgcagatcggacgcgaaagtctgtggcacttc
atgaagtgggtgcgtgaggacttctcgctgccagatgtaccggtactgatgaaccatgca
gtattcagtttcgatctctccctgatcccgctgctggcgaacctggcaaccggagggcac
attgttttgaatgcaaaagaggatattgcagccgaaaactggctcgatcgcctgaaagat
aacggcgtttccgtctgggtttcaacgccatctttcgcctatcagaagctgctttctcct
cagttcaacagtgaatatttacctgaacttagcgtcttcgtatttattggcgaagtgtta
aataaggcgttagtaaaacagctacgccgccgcttcccgcacgctaaaatcctcaattcc
tatggcccaacggaagcgaccgtcgctaccaccgttatcgaaatcaccgacgacatcctg
cacagcgaaaacgatctgctgcccgtcggtgcgatgatgccggactccagaatggagatt
acctctgagggggagctgatcatttgggggaaaaacgtgatgcgtggctaccttgggctc
gcgcaggagaacgctgagaaattgttgcatcgggaaagtgaagcattccgaggctacaga
accggcgacttgggctatgagaacgggttgttgtactgtcaggggcgaaatgacagccag
atcaaactcaatggttaccgtattgaaatcaacgaaattgaaaaccgcctgctggcgata
tccgatatcagcgaagcggttgttctgccgctgatgaagtcaggcggaggtgttctgcgt
atcgcggcgttctgcgtgacgaacttagcaccagaagcgattaaaacctcgctctctaag
gtgattccgccctatatggtgccttcccaaattattatcaaagacgcgttgccgctgaat
cctaacggcaagattgaccgtaaactgctggacactcatgcccgcaccatttaa
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