Pectobacterium parmentieri SCC3193: W5S_3672
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Entry
W5S_3672 CDS
T02514
Name
(GenBank) putative organic radical activating enzyme
KO
K10026
7-carboxy-7-deazaguanine synthase [EC:
4.3.99.3
]
Organism
pec
Pectobacterium parmentieri SCC3193
Pathway
pec00790
Folate biosynthesis
pec01100
Metabolic pathways
Module
pec_M00988
PreQ1 biosynthesis, GTP => 7-Aminomethyl-7-deazaguanine
Brite
KEGG Orthology (KO) [BR:
pec00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00790 Folate biosynthesis
W5S_3672
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pec03016
]
W5S_3672
Enzymes [BR:
pec01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.99 Other carbon-nitrogen lyases
4.3.99.3 7-carboxy-7-deazaguanine synthase
W5S_3672
Transfer RNA biogenesis [BR:
pec03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
W5S_3672
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
Fer4_12
EutB
Motif
Other DBs
NCBI-ProteinID:
AFI91735
UniProt:
A0A0H3I6X0
LinkDB
All DBs
Position
complement(3940853..3941524)
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AA seq
223 aa
AA seq
DB search
MQYPINEMFQTLQGEGYFTGVPAVFVRLQGCPVGCSWCDTKHTWDKLAERETSLDLVLVK
TGESDAWGAASADDILALMVQQGYTARHIVITGGEPCIHDLAPLTLQLEKQGFSCQIETS
GTHDVRCSPKTWVTVSPKVNMRGGMKVLDQALQRADEIKHPVARERDIEALDALLARLDD
DKPRIVALQPISQKEDATKLCIATCIARNWRLSMQTHKYLNIA
NT seq
672 nt
NT seq
+upstream
nt +downstream
nt
atgcagtacccgattaatgaaatgttccagacgttacagggcgaaggctattttaccggt
gttccggcggtgtttgtgcggctgcaaggttgcccggtaggctgtagctggtgcgatacc
aaacatacctgggacaaactggcagagcgggaaacctcattggatctggtgctggtaaag
acgggagaaagtgatgcctggggcgcggcgagtgcggacgatattctggcgctgatggtg
cagcagggttacacggcacgccatattgtgattactggcggcgagccctgtatccatgat
ttggcaccgctgacgctacagttggaaaaacagggattcagttgccagatcgaaaccagc
ggtacgcacgacgtgcggtgttcgcccaaaacctgggtgacggtttcgccgaaagtgaac
atgcgtggcggcatgaaggtgcttgatcaggcgctgcagcgggcggatgagatcaaacac
ccggtggcgcgtgaacgtgacattgaggcgctggatgctctgctggcgcggcttgatgat
gataaaccgcgcatcgtagcgctacagccgatcagtcagaaagaggatgcgaccaaactg
tgcatcgcgacctgtatcgcccgcaactggcggctttccatgcagacacataaatacctg
aatatcgcctga
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