Pectobacterium parmentieri SCC3193: W5S_3894
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Entry
W5S_3894 CDS
T02514
Name
(GenBank) Pyruvate dehydrogenase E1 component
KO
K00163
pyruvate dehydrogenase E1 component [EC:
1.2.4.1
]
Organism
pec
Pectobacterium parmentieri SCC3193
Pathway
pec00010
Glycolysis / Gluconeogenesis
pec00020
Citrate cycle (TCA cycle)
pec00620
Pyruvate metabolism
pec00785
Lipoic acid metabolism
pec01100
Metabolic pathways
pec01110
Biosynthesis of secondary metabolites
pec01120
Microbial metabolism in diverse environments
pec01200
Carbon metabolism
pec01210
2-Oxocarboxylic acid metabolism
Module
pec_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
pec00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
W5S_3894
00020 Citrate cycle (TCA cycle)
W5S_3894
00620 Pyruvate metabolism
W5S_3894
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
W5S_3894
Enzymes [BR:
pec01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.1 pyruvate dehydrogenase (acetyl-transferring)
W5S_3894
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Gene cluster
GFIT
Motif
Pfam:
PDH_E1_M
Transketolase_C_1
Transketolase_N
Transketolase_C
Motif
Other DBs
NCBI-ProteinID:
AFI91957
UniProt:
A0A0H3I9X2
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Position
complement(4203497..4206160)
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AA seq
887 aa
AA seq
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MSDRLNNDVDPIETRDWLQAIESVIREEGVERAQFLIDQVLSEARKGGVSVAAGLAARQY
VNTIAVEDEPEYPGDLDLESRIRSAIRWNAIMTVSRASKKDLDLGGHMASFQSSATFYEV
CFNHFFRARNAQDGGDLVYFQGHISPGVYARAFLEGRLTEDQMNNFRQEVHGNGLSSYPH
PKLMPEFWQFPTVSMGLGPIGSIYQAKFLKYLEHRGLKDTSKQTVYAFLGDGEMDEPESK
GAITIATREKLDNLVFVINCNLQRLDGPVTGNGKIINELEGIFSGAGWDVIKVIWGGRWD
ELLRKDTSGKLIQLMNETVDGDYQTFKSKNGAYVREHFFGKYPETAALVKDWTDDQIWAL
NRGGHDPKKVYAALKKAQETKGKPTVILAHTIKGYGMGDAAEGKNIAHQVKKINMDGVRY
FRDRFNVPVSDENIEKLPYITFDKDSAEYKYLHERRQALEGYLPTRQPKFSEKLELPTLE
DFRTLLEEQNKEISTTIAFVRALNVMLKNPSIKDRLVPIIADEARTFGMEGLFRQIGIYS
PNGQQYTPQDREQVAYYKEDEKGQILQEGINELGAGSSWLAAATSYSTNDLPMIPFYIYY
SMFGFQRIGDLCWAAGDQQARGFLVGGTSGRTTLNGEGLQHEDGHSHIQSLTIPNCISYD
PSYAYEVAVIMHDGLNRMYGEAQENIYYYITTLNENYHMPAMPQGAEEGIRKGIYKLETV
DGNKGKVQLLGSGSILRHVREAAQILAKDYGIGSDVFSVTSFTELAREGQDCERWNMLHP
TEAPRVPYVAQVLSDAPAVASTDYMKLFAEQIRNFIPASDYRVLGTDGFGRSDSRENLRH
HFEVDASYVVVAALGELAKRGEIDKKVVADAITKFNIDADKVNPRLA
NT seq
2664 nt
NT seq
+upstream
nt +downstream
nt
atgtcagatcgtttaaataatgacgtggatccgatcgaaacccgcgactggctgcaggcg
atcgaatcggtcatccgtgaagagggtgttgagcgcgctcagttcctgatagatcaggtc
ctgagtgaagcacgtaaaggcggcgtcagtgttgctgctggtctggctgcgcgtcaatac
gtcaacaccatcgctgtggaagacgaaccggaatacccaggtgacctggatctggaaagc
cgtattcgctcagcgattcgctggaacgcaataatgacagtgtcgcgtgcctcgaaaaaa
gatctggatctgggcggccacatggcttctttccagtcttccgccacattctacgaagtg
tgtttcaaccacttcttccgtgctcgcaatgcgcaggacggcggcgacctggtgtacttc
cagggccacatttctccgggcgtttacgctcgtgccttccttgaaggccgtctgactgaa
gatcagatgaacaacttccgtcaggaagttcacggtaacggtctgtcttcttatccgcat
cctaaattgatgccggaattctggcagttcccgaccgtttctatggggctgggcccgatt
ggctcgatctaccaagctaagttcctgaaatatctggaacaccgtggcctgaaagatacc
tctaagcaaaccgtttatgccttcctgggcgacggtgaaatggacgaaccagaatccaaa
ggtgcgatcaccatcgcgacccgtgaaaaactggacaacctggtcttcgttatcaactgt
aacctgcaacgtctggatggcccagtaaccggtaatggcaagatcattaacgaactggaa
ggtattttcagcggtgctggctgggatgttatcaaggttatctggggcggacgttgggac
gaactgctgcgtaaagataccagcggtaaactgatccaactgatgaacgaaaccgttgac
ggcgactaccagacgttcaaatccaaaaacggtgcctatgtgcgtgagcacttcttcggt
aaatatccggagacggctgcactggttaaagactggaccgacgatcaaatttgggcactg
aaccgtggtggtcacgatccgaagaaagtctacgctgcactgaaaaaagcacaggaaacc
aagggcaaaccaaccgttatcctggcgcataccattaaaggttatggtatgggcgacgcg
gctgaaggtaaaaacatcgctcaccaggttaagaaaattaacatggacggcgtgcgttac
ttccgcgatcgtttcaacgtgccagttagcgatgaaaatatcgagaaactgccgtacatc
acctttgataaagattccgcagagtacaaatacctgcatgagcgtcgtcaggcactggaa
ggctacctgccaacccgtcagcctaaattcagcgaaaagctggaactgccaacgctggaa
gatttccgcacgctgctggaagagcagaataaagaaatctccaccacaatcgctttcgtt
cgtgctctgaacgtgatgctgaagaacccgtctatcaaagatcgtctggttccgatcatt
gccgacgaagcgcgtactttcggtatggaaggtctgttccgtcagatcggtatttacagc
ccgaatggccagcagtacaccccgcaggaccgtgagcaggttgcttactacaaagaagac
gaaaaaggccagatcctgcaagaagggatcaacgaactgggcgcaggttcttcctggctg
gcggcggcaacgtcttacagcaccaacgatctgccgatgatcccgttctacatctactac
tccatgttcggtttccagcgtatcggcgatctgtgctgggcagcgggtgaccaacaggcg
cgtggcttcctggtcggtggtacttctggtcgtactacgctgaacggtgaaggtctgcaa
cacgaagatggccatagccatattcagtctctgactatcccgaactgtatttcttacgat
ccgtcctacgcttatgaagtggctgtcatcatgcatgacggtctgaatcgtatgtacggc
gaagcgcaagaaaacatttactactacatcaccacgctgaacgaaaactaccacatgcct
gcgatgccgcagggtgcggaagaaggtatccgtaagggtatctacaagctggaaacggtt
gatggtaacaaaggtaaagttcagttgctgggctctggttctatcctgcgtcacgtgcgt
gaagcagctcagattctggcgaaagactacggcatcggttctgacgtattcagcgtaacc
tccttcactgaactggcacgcgaaggccaggattgtgagcgttggaatatgctgcatcca
accgaagcgccacgtgtaccttacgtggctcaggtactgagcgatgcgccagcggttgca
tctactgactacatgaagctgtttgctgagcaaatccgtaacttcatcccggctagcgat
taccgcgtactgggtactgacggtttcggtcgttctgacagccgtgaaaacctgcgccac
cacttcgaagtggatgcgtcttacgtcgtggttgcggctctgggtgaactggctaaacgc
ggtgaaatcgataagaaagtggttgctgatgccatcactaaattcaacatcgatgcagat
aaagttaacccgcgtctggcataa
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