Pectobacterium parmentieri SCC3193: W5S_4673 Help Entry W5S_4673          CDS       T02514                                  Name (GenBank) DNA ligase B   KO K01972   DNA ligase (NAD+) [EC:6.5.1.2] Organism pec  Pectobacterium parmentieri SCC3193 Pathway pec03030   DNA replication pec03410   Base excision repair pec03420   Nucleotide excision repair pec03430   Mismatch repair Brite KEGG Orthology (KO) [BR:pec00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     W5S_4673    03410 Base excision repair     W5S_4673    03420 Nucleotide excision repair     W5S_4673    03430 Mismatch repair     W5S_4673  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:pec03032]     W5S_4673    03400 DNA repair and recombination proteins [BR:pec03400]     W5S_4673 Enzymes [BR:pec01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.2  DNA ligase (NAD+)      W5S_4673 DNA replication proteins [BR:pec03032]  Prokaryotic type   DNA Replication Elongation Factors    Elongation factors (bacterial)     Other elongation factors      W5S_4673 DNA repair and recombination proteins [BR:pec03400]  Prokaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     DNA ligase      W5S_4673    NER (nucleotide excision repair)     GGR (global genome repair) factors      W5S_4673    MMR (mismatch excision repair)     DNA ligase      W5S_4673   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      RecET pathway       W5S_4673 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_aden DNA_ligase_OB RNA_ligase DUF3701 Motif Other DBs NCBI-ProteinID:  AFI92718 UniProt:  A0A0H3ICC7 LinkDB All DBs Position complement(5026085..5027776) Genome browser AA seq 563 aa AA seqDB search MWLRISAFLIIIFVGNISSFPVVAAVCPDWGNARSNKEITALRQQLERWDDVYYTEGKSP VEDDVYDQLREQLNQWLSCFQPQNAIPVRLPDNGKQRHPVAHTGLKKVSDRGQLVQWIAQ REDLWIQPKVDGVAITLVYQHGKLVSAVSRGNGLQGEDWTEKVRLIPGVPHLLTGAPSSL VLQGELFLKMTDHRQYTQGGVNARSVVAGEMRRHQPSPVLSQISLFVWEWPDGPKAMPER LEKLKEMGFAMTAGYTHAIESFADAEKWRHYWHHSPLPFVTDGVVIRQTKEPQGRYWRNT SADWAIAWKYPPVHQVAEVTDVAFSVGRTGKIAVVLKLNPMKLDDKLVSRVNVGSLSRWK QWDVLPGDRVSVSLAGQGIPRLDSVAWRGAERPALVPPNEHDFHAFSCFRYSAVCQQQFL ARLVWLSGEHGLNLAGMRDGMWLRLMQHDLLGDVLAWLSLTEAQLNAVNGMGDKRARDIY TSLQSTRQVPLSRWLLALGIPVPRSARSALDHADWLALQQRTAQQWRQFSGIGERRAEEI MAFLNHPIVVEFIARLEREGIHR NT seq 1692 nt NT seq  +upstreamnt  +downstreamnt atgtggctcaggatcagcgcgtttttgattatcatctttgttggaaatatcagcagtttc cctgtggtggcagcggtgtgtcccgactgggggaacgcgcgttcgaacaaagaaattact gcattacgtcagcagctagaacggtgggatgacgtgtattacaccgaaggtaaaagcccg gtagaggatgatgtttatgatcaactgcgagaacagttaaaccagtggctgagctgtttt cagccccaaaacgcaattcctgtccggttacccgataatggcaagcaacgtcatcctgtt gcccatacgggattgaaaaaagtgtccgatcgcgggcagttggtgcaatggatcgcacag cgtgaggatttatggattcagccaaaagttgatggtgtagccatcacgctggtttatcag cacggcaagctcgtgtctgcggtgagtagaggaaacggtctgcaaggcgaagattggacg gaaaaagttcgtctgattccgggagttcctcatctattaaccggtgcaccttcctcatta gtattacaaggggagcttttcctgaagatgaccgatcatcgacagtatacacagggcggt gttaatgcacgctcggtcgtggctggtgaaatgcgtcgtcatcagccatcccctgtgttg tcacagattagtttgtttgtctgggaatggccggatggcccaaaggcgatgcccgagcgt ttggaaaaattgaaggaaatggggtttgccatgaccgcgggctatacccatgcgattgag tcattcgccgacgccgagaaatggcgtcactactggcatcacagcccgctgcccttcgtg acggatggcgtggtcattcgccagactaaagaaccgcaggggcgctattggcgtaacaca tcggctgactgggcgattgcgtggaaatatccgcccgttcatcaggttgcggaagtcacc gatgtggcattctctgtcggacggacgggtaagatcgccgtggtgttaaagcttaatcct atgaaattggatgataaattggtcagtcgggtgaatgtgggttcgctgtctcgttggaaa caatgggacgtgctgcccggcgatcgcgtgagtgtcagtctggcgggacaagggattcca cgcctggatagtgtagcgtggcgtggggctgaacggcctgctctcgttccacccaatgaa catgatttccatgcttttagctgttttcgctatagcgcggtgtgccagcagcaatttctg gcgcgcttagtctggttgagtggggagcatggtttaaatctggcggggatgcgtgacggg atgtggttgcgtttgatgcaacatgatttactgggagatgtactggcatggctatctctg acggaggcacagcttaacgccgttaatggcatgggtgataaacgggcgcgagatatctat acgagcttgcagtcgacacggcaggtgccactatctcgctggttacttgcattaggtatt cctgttccccgctcagcgcgtagcgcattggatcatgcggattggctggcattacagcaa cggacggcgcagcagtggcgacagttttcgggcattggggagcggcgtgcagaagaaatt atggcgttcctgaaccatcccatcgtcgttgagtttattgcccgattagagcgcgaaggg atacatcgataa

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