Psittacula echo (Mauritius parakeet): 308222000
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Entry
308222000 CDS
T12082
Symbol
LFNG
Name
(RefSeq) beta-1,3-N-acetylglucosaminyltransferase lunatic fringe
KO
K05948
fringe [EC:
2.4.1.222
]
Organism
pech
Psittacula echo (Mauritius parakeet)
Pathway
pech00514
Other types of O-glycan biosynthesis
pech04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
pech00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
308222000 (LFNG)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
308222000 (LFNG)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pech01003
]
308222000 (LFNG)
Enzymes [BR:
pech01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.222 O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
308222000 (LFNG)
Glycosyltransferases [BR:
pech01003
]
Glycan extension
O-Glycan
308222000 (LFNG)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fringe
Galactosyl_T
Motif
Other DBs
NCBI-GeneID:
308222000
NCBI-ProteinID:
XP_080475606
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All DBs
Position
5:complement(4904507..4915278)
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AA seq
364 aa
AA seq
DB search
MLKSCGRKLLLSLVGSMFTCLLVLMVEPPGRPGLARGEAGGAQRALQSLGAAASPAAQGP
PALRSFADYFGRLSRARREVPPAPPSPPRPPAEDISPRDVFIAVKTTKKFHKARLELLLD
TWISRNRDMTFIFTDGEDEELKKQARNVINTNCSAAHSRQALSCKMAVEYDKFIESGRKW
FCHVDDDNYVNVRMLVKLLSSYPHTQDIYIGKPSLDRPIQATERISENKMHPVHFWFATG
GAGFCISRGLALKMSPWASGGHFMSTAEKIRLPDDCTIGYIIESVLGVKLIRSNLFHSHL
ENLHQVPKTEIHKQVTLSYGMFENKRNSIHMKGAFSVEEDPSRFRSVHCLLYPDTPWCPA
NMVY
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atgctgaagagctgcgggaggaagctgctcctgtccctcgtgggctccatgttcacctgc
ctcctggtgctcatggtggagccgccggggcggccggggctggcccgcggggaggccggc
ggggcgcagagggcattgcagagcctgggggctgcggcttcccccgcggcacagggtccc
cccgctctccgcagcttcgccgactacttcgggcggctgagccgagcccgacgggaggtc
cccccagccccgccgagccccccgcggccgccggccgaggacatctccccccgcgatgtg
ttcatcgccgtcaagaccaccaagaagtttcacaaggcgcggctggagctgctgctcgac
acatggatctcccgcaaccgcgacatgaccttcatcttcacggatggggaggatgaggag
ctgaagaagcaagcacgaaatgtcatcaacaccaactgctcggctgcccacagccgccag
gccctgtcctgcaagatggctgtggagtacgacaagttcattgagtccggcagaaagtgg
ttctgccacgtggatgatgacaactacgtgaacgtgcggatgctggtgaagctgctctcc
agttacccacacacacaggacatctacatcgggaagcccagcctggaccggcccatccag
gctacggagaggatcagtgagaacaagatgcaccctgtgcatttctggtttgccacgggc
ggagcggggttttgtatcagccgggggctggcactgaagatgagcccatgggccagtggc
ggccacttcatgagcacagcggagaagatccgcctgcccgatgactgcaccatcggctac
atcatcgagtccgtgctgggggtgaagctcatccggagcaacctcttccactcccacctg
gagaacctgcaccaggtgcccaagacagagatccacaaacaggtgacactaagctacggc
atgttcgagaacaagcgcaactccatccacatgaagggagccttctccgtcgaggaggac
ccatccaggttccgctccgtgcactgcctgctgtaccccgacacgccgtggtgccccgcc
aacatggtttactag
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