Psittacula echo (Mauritius parakeet): 308226951
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Entry
308226951 CDS
T12082
Symbol
RFNG
Name
(RefSeq) beta-1,3-N-acetylglucosaminyltransferase radical fringe isoform 1
KO
K05948
fringe [EC:
2.4.1.222
]
Organism
pech
Psittacula echo (Mauritius parakeet)
Pathway
pech00514
Other types of O-glycan biosynthesis
pech04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
pech00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
308226951 (RFNG)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
308226951 (RFNG)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pech01003
]
308226951 (RFNG)
Enzymes [BR:
pech01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.222 O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
308226951 (RFNG)
Glycosyltransferases [BR:
pech01003
]
Glycan extension
O-Glycan
308226951 (RFNG)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fringe
Galactosyl_T
Motif
Other DBs
NCBI-GeneID:
308226951
NCBI-ProteinID:
XP_080485252
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All DBs
Position
14:424907..432904
Genome browser
AA seq
372 aa
AA seq
DB search
MSPCLGLRKACFLLSISAAALLLLLLPRGQPPAEPRRRPPPAAGSSRSSPQRPVSGSSAV
SGTRTGSRGEPADETGGLAGSLQLMRKSRPGTVGGSGRESLELKDIFIAVKTTRKYHKSR
LDLLLQTWISQARGQTFIFTDWEDRELRLKAGDHMINTNCSAVHTRQALCCKMSVEYDKF
LESGQKWFCHVDDDNYVNPRTLLRLLSAFSHSQDVYVGRPSLDHPIEAADHVQSDGSKTT
VKFWFATGGAGFCISRGLALKMSPWASLGNFISTAERVRLPDDCTIGYIIEGLLEVKLLH
SPLFHSHLENLQRLQGESVLQQVTLSYGDPENKHNVVSVGGVFGIQQDPTRFKSVHCLLY
PDTIWCPAKKMS
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgagcccctgtctggggctccgtaaggcctgcttcctgctgtccattagcgctgccgcc
ctcctcctgctcctgctgccgcgggggcagccccccgctgagccccgccgccgcccgccg
ccagccgccgggtcgagcaggtcctcgccgcagcggccggtctccgggagcagcgctgtg
tccggcacgcggacgggctctcgcggggagccggcggacgagactggaggcctcgccggc
agcttgcagctcatgcggaagagccgccctgggaccgtcgggggctcgggcagagaaagc
ctggagctgaaggacatcttcattgcggtgaagaccacgaggaagtaccacaagagtcgg
ctggacttgctgcttcagacctggatctcccaggccaggggacagacatttatattcacg
gactgggaggatcgggagctacgtctgaaagcaggggatcatatgatcaacaccaactgt
tctgctgtccatactcgtcaagctctctgctgcaagatgtctgtggaatatgataagttc
ctggaatctgggcaaaaatggttttgccatgtagatgatgacaactacgtgaaccctcgg
actctcctgcgtctcttatctgccttctcacacagccaggatgtctacgtggggcgacca
agcctggaccatcccattgaagcagctgatcatgtccaaagtgatggatcaaagacaacc
gtgaaattctggtttgccacaggtggagcagggttctgtatcagcagaggtcttgccctg
aagatgagtccctgggccagcttgggtaatttcatcagtactgcagaaagagtgcgtctt
cctgacgactgcactattggctacatcattgaagggctgctggaggtgaagctgctgcat
agcccattgttccattcccatctggaaaatctgcaaagactacaaggcgagtctgtgctg
caacaggtaaccctaagttatggagaccctgagaacaaacacaatgttgtgagtgtggga
ggagtgtttggcattcagcaagatccaacacgattcaaatctgtccattgtctgctctat
cctgacactatttggtgccctgctaagaagatgtcataa
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