Psittacula echo (Mauritius parakeet): 308229574
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Entry
308229574 CDS
T12082
Symbol
SCN4A
Name
(RefSeq) sodium channel protein type 4 subunit alpha
KO
K04837
voltage-gated sodium channel type IV alpha
Organism
pech Psittacula echo (Mauritius parakeet)
Brite
KEGG Orthology (KO) [BR:
pech00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pech04040
]
308229574 (SCN4A)
Ion channels [BR:
pech04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
308229574 (SCN4A)
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Ortholog
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GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
IQ
GPHH
HpsJ
Motif
Other DBs
NCBI-GeneID:
308229574
NCBI-ProteinID:
XP_080489760
LinkDB
All DBs
Position
23:complement(<3272472..3297821)
Genome browser
AA seq
1845 aa
AA seq
DB search
MAGLNIPGIENLRPFTPASLAAIEQRIAEAEALRIKRQHVELPEEEEIKPRSDLEAGKNL
PLIYGDPPLELIGTPLEDLDPFYKDKKTFIVLNKGKCIYRFSATPALYLLGPFHPIRRGA
IKVLIHSYPCPLCMFIMITILTNCVFMTMSNPPAWSKNVEYTFTGIYTFESLIKILSRGF
CINDFTFLRDPWNWLDFMVISMAYITEFVDLGNISALRTFRVLRALKTITVIPGLKTIVG
ALIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRHKCVRWPPLNDTLLEDLGLDTDTM
ANATLYGNFSADTADNFTGNFTGNFTGNSTFDFEAYINDEANFYFLEGALDALLCGNSSD
AGKCPEGYQCMKAGRNPNYGYTSYDTFSWAFLALFRLMTQDFWENLFQLTLRAAGKTYMI
FFVVVIFLGSFYLINLILAVVAMAYAEQNDATLLEEQQKEEEFQQLMEQLKKQQEEQEKT
LQDQRSSSSSLPSSVAEKERDSDLNSDQDKAKDCNGQVIPKVVLQRSATVVDFKPVNDLE
KPDHNHLSVGNQDGPGLEKRVGSAASVLSNAVEELEEAHQKCPPWWYKFAHTFLVWNCCL
PWRKLKEFVKLVVMDPFVDLGITICIVLNTLFMAMEHYPMTEEFENVLSVGNLVFTGIFT
AEMVLKLIALDPYEYFQQGWNIFDSIIVTLSLVELGLANVQGLSVLRSFRLLRVFKLAKS
WPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYIECVCKISVDCTLPRW
HMHDFFHSFLIVFRILCGEWIETMWDCMEVAGQTMCLIVFMMVMVIGNLVVLNLFLALLL
SSFSADSLAASDDDGEMNNLQIAIGRITRGIDFVKTSVITLLRRLWKGKKVAPEEEQEPS
KTDNSVLNHVDTGQEPKSEYLDGITGKEHFFMDELDHMNFINNPNLTVQVPIASEESDLY
EETSTQSDTEDAKNPLSSDNASSFCSTVDYKPPEPEQEEVAEEAEESNEPEECFTEACVK
RFPCLYVDITSDRGRLWWNLRKACFRIVEHDWFETFIVFMILLSSGALAFEDIYIEQRKV
IRTILEYADKVFSYVFVIEMLLKWVAYGFKVYFTNAWCWLDFLIVDVSLVSLTANWLGYS
ELGAIKSLRTLRALRPLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVN
LFAGKYYRCVNTTTGELFDISIVNNKSDCMALLYTNEVRWVNVKVNFDNVGLGYLSLLQV
ATFKGWMDIMYAAVDSREIEEQPMYEINLYMYIYFVIFIIFGAFFTLNLFIGVIIDNFNQ
QKKKISKDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPANKFQGMVYTLVTKQVFDIVIMI
LICLNMVTMMVETDDQSELKTSVLYKINLVFIVIFTGECVLKMFALRQYFFTIGWNIFDF
VVVILSILGIVLSDIIEKYFVSPTLFRVIRLARIGRVLRLIRGAKGIRTLLFALMMSLPA
LFNIGLLLFLVMFIYSIFGMSNFAYVKKEAGIDDIFNFETFGNSIICLFQITTSAGWDGL
LSPILNSGPPDCDPDLENPGSSVKGDCGNPSIGIFFFCSYIIISFLIVVNMYIAIILENF
SVATEESSEPLCEDDFEMFYEIWEKFDPDATQFIAYSTLSDFVDTLQEPLRIPKPNKIKL
VTMDLPMVAGDKIHCLDILFALTKEVLGDSGEMDALKATMEEKFMAANPSKVSYEPITTT
LKRKHEEVCATKIQRAFRRYLLRRSVKQASYMYRHSKDEDALTEDAPEKEGLIATKMHEM
YGNSGADVEAAPAFGLEPVPGSETQGAPEEAKAWDKERVVKESLV
NT seq
5538 nt
NT seq
+upstream
nt +downstream
nt
atggccggccttaacatcccgggcatcgagaacctgcgccccttcacgcccgcctcgctg
gctgccatcgagcagcgcatcgctgaggccgaggcgctccggataaagaggcagcacgtg
gagctgcccgaggaggaagagatcaaacccaggagcgacctggaagccgggaagaacctg
cccctcatctatggtgacccccccctggagctcatcgggaccccgctggaggacctggac
ccgttctacaaggacaagaagacattcatagtcctcaacaaagggaagtgcatctaccgc
ttctcagcaacccctgccctctacctgctggggcccttccaccccatccgcagaggagcc
atcaaagtgcttatccattcatatccttgccctctgtgcatgttcatcatgatcaccatt
ttaaccaactgcgtgtttatgacgatgagcaaccccccggcatggtccaagaacgtggaa
tacaccttcaccgggatatacacctttgagtccctcatcaagatactgtcaagaggcttc
tgtatcaacgacttcacattcctgcgcgacccgtggaattggctggacttcatggtcatc
tccatggcctacattaccgagttcgtggacctggggaacatctctgctctcagaaccttc
cgtgtcctccgtgccttgaaaaccatcaccgtgataccagggctgaagaccatcgtgggg
gctctgatccagtcggtgaagaagctctcggacgtgatgatcctcaccgtcttctgcctg
agcgtgttcgccctcatcggcctccagctcttcatgggcaacctgcggcataagtgcgtg
cggtggccgcccctcaatgacaccttgctggaggacctggggctggacaccgacaccatg
gccaacgcaacgctctacggcaacttcagcgctgacacggccgacaacttcaccggcaac
ttcaccggcaacttcaccggcaacagcacctttgattttgaggcctatatcaatgatgaa
gccaatttctacttcctggagggagcgctggacgccctgctctgcgggaacagcagcgat
gctgggaagtgccctgaagggtaccagtgcatgaaggcagggaggaacccgaactacggc
tacaccagctacgacaccttcagctgggctttcctggccctcttccgcctcatgacacag
gacttctgggagaacctcttccagctgacgctgcgtgcagcagggaaaacgtacatgatc
ttcttcgtggtggttatattccttggctccttctacctcatcaacctcatcctcgcggtg
gtggccatggcttacgcggagcagaacgatgccacgctgctggaggagcagcagaaggaa
gaggaattccagcagctcatggagcagctgaagaagcagcaagaggagcaagagaagacg
ttgcaggaccagaggtccagcagcagttccctgcccagcagcgtggctgagaaggagcga
gactcagacctcaacagtgaccaggacaaggcaaaggactgcaatgggcaagtgatcccc
aaggtcgtgctgcagcgctctgccacagtggttgatttcaagccagtcaatgacctggag
aaacctgaccacaaccacctctctgtaggcaaccaggatgggccaggccttgagaagagg
gtggggagcgccgccagtgtcctctccaacgctgtggaagagctggaggaagctcaccag
aagtgcccgccctggtggtataaatttgcccacacgttcttggtgtggaactgctgtctc
ccgtggcggaagctgaaggagtttgtcaagctggtggtgatggaccccttcgtggacctg
ggcatcaccatctgcattgtgctcaacacactcttcatggccatggagcattaccccatg
acggaggagtttgagaacgtgctgagcgttgggaacctggtcttcacggggatcttcacg
gcagagatggttctgaagctcattgccctggacccctacgagtatttccagcagggctgg
aacatcttcgacagcatcatcgtcaccctgagcctggtggagctgggcctggccaatgtg
caagggctctcagtgctccgctccttccgcttgctgagggttttcaagctcgccaagtcc
tggcccaccctcaacatgctcatcaagatcattggcaactcggtgggtgccctggggaac
ctcacgctggtgctggccatcatcgtcttcatcttcgccgtggtggggatgcagctcttt
gggaagagctacatagagtgcgtgtgcaagatctccgtggactgcacgctgccccgctgg
cacatgcatgacttcttccactccttcctcatcgtcttccgcatcctctgcggggagtgg
atcgagaccatgtgggactgcatggaggtggctggccagaccatgtgtctcatcgtcttc
atgatggtcatggtcatcgggaacctcgtggttctgaacctgttcttggctctgttgctg
agctccttcagcgctgacagcctggcagcatctgatgacgacggggagatgaacaacctg
caaatcgctattggcaggatcaccagggggatcgactttgtaaagacctctgtcatcacg
ctgctccgcaggttgtggaaggggaagaaggtggccccagaggaagagcaagagcccagt
aagacggacaactctgtgctaaaccatgtggacaccggccaggagcccaagtcggaatac
ctggatggcatcactggcaaagagcacttcttcatggatgaactggaccacatgaatttc
atcaacaaccccaacctgacggtgcaggtccccattgcctccgaggagtctgacctctac
gaggagaccagcacccagtccgacaccgaggatgccaagaaccctctctccagtgacaac
gcgtcgtccttctgcagcaccgtggattacaagcccccggagccagagcaggaggaggtg
gcagaagaagctgaggagagcaatgagcccgaggagtgcttcaccgaagcctgcgtgaag
aggtttccctgcctctatgtggacatcaccagcgacagagggaggctatggtggaacctc
cggaaagcctgcttccgcatcgtggagcacgactggttcgagaccttcattgtcttcatg
atcctcctcagcagcggggcgctggcttttgaggacatctacatcgagcaacgaaaggtg
atacgcaccatcctggagtacgccgacaaagtcttctcctacgtcttcgtcattgagatg
ctgctcaagtgggtggcctatggcttcaaggtgtacttcaccaacgcgtggtgctggctg
gatttcctcattgtcgatgtttcccttgtcagcctgacagcgaactggctgggatactcg
gagctgggagccatcaagtcactgcggacactgagggcgctgagaccactgcgtgccctg
tccagatttgaaggcatgcgggtggtggtgaatgccttgctgggggccatcccctccatc
atgaacgtcctgctggtgtgcctcatcttctggctgatattcagcattatgggggtgaac
ctgtttgcagggaagtactaccgctgcgtcaacaccaccacgggcgagctcttcgacatc
agcatcgtgaacaacaagagcgactgcatggccctgctctacaccaacgaggtcagatgg
gtcaacgtcaaggtcaactttgacaacgtgggcttgggatacctctccttgctgcaggtg
gcaaccttcaagggctggatggacatcatgtacgcagccgtggactcgcgtgagattgag
gagcagccaatgtacgagatcaacctctacatgtacatctacttcgtcatcttcatcatc
tttggtgccttcttcaccctgaacctcttcatcggcgtcatcatcgacaacttcaaccag
cagaagaaaaagataagcaaagacatcttcatgacagaagagcagaagaaatactacaat
gccatgaagaagctcggctccaagaaaccccagaagcccatccccaggccagcgaacaag
tttcaagggatggtgtacacccttgttaccaagcaagtgtttgacatagtcatcatgatc
ctgatctgtcttaacatggtgaccatgatggttgaaacagacgatcaaagcgaactcaaa
acgtctgttctctacaagataaacctggtcttcatcgtcatcttcaccggagagtgcgtg
ctcaaaatgttcgccttgcggcagtacttcttcaccatcggctggaacatctttgacttc
gtggtcgtcatcctctccatcttaggtatcgtcctctcagacatcatagagaagtatttc
gtgtcacccactctcttcagggtcatcaggctggcaaggattggccgcgtcctccggctg
atccgaggggcaaaaggcatccggacccttctctttgctctgatgatgtccctgcctgcc
ctgttcaacatcggcctcctgcttttccttgtcatgttcatctactccatctttgggatg
tccaacttcgcctatgtgaagaaggaggcggggatcgatgacatcttcaacttcgagact
tttgggaacagcatcatctgcctcttccagatcaccacgtcggcgggatgggatggcctc
ctcagccccatcctcaacagcggccctcccgactgcgaccccgacctggaaaaccctggc
agttcagtgaaaggggactgtggaaacccatccatcggcatcttcttcttctgcagctac
atcatcatctccttcctcatcgtggtgaacatgtacatcgccatcatcctggagaacttc
agcgtggccacggaggagagcagtgaacccctctgtgaggatgattttgaaatgttctat
gaaatctgggagaagtttgaccctgatgccacccagttcattgcgtacagcaccttgtct
gactttgtggacaccttacaggagccactccgaattcccaagccgaacaagatcaagcta
gtcaccatggacctgccaatggttgctggggacaaaatccactgtctggatatcctcttt
gccctgactaaggaagtgctgggagactcaggagagatggatgccttgaaggccaccatg
gaggagaagttcatggccgcaaacccctcgaaggtttcctatgaacccatcaccaccact
ctgaagcggaagcacgaggaagtctgtgctacgaaaatccagcgggctttccggaggtac
ctcctgaggcgctcggtgaagcaggcatcctacatgtacaggcacagcaaggacgaggac
gccttgaccgaggatgcacccgagaaggaaggtctgatcgccaccaaaatgcacgagatg
tacgggaacagcggggcagacgtggaggcagcccctgccttcggtctggagcccgttccc
ggctcggagacgcaaggtgctcccgaagaagcaaaagcatgggataaggaacgcgttgtg
aaagagtcgctggtgtaa
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