Pseudonocardia sp. EC080619-01: AD017_19355 Help Entry AD017_19355       CDS       T04234                                  Name (GenBank) DNA ligase   KO K01972   DNA ligase (NAD+) [EC:6.5.1.2] Organism pecq  Pseudonocardia sp. EC080619-01 Pathway pecq03030   DNA replication pecq03410   Base excision repair pecq03420   Nucleotide excision repair pecq03430   Mismatch repair Brite KEGG Orthology (KO) [BR:pecq00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     AD017_19355    03410 Base excision repair     AD017_19355    03420 Nucleotide excision repair     AD017_19355    03430 Mismatch repair     AD017_19355  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:pecq03032]     AD017_19355    03400 DNA repair and recombination proteins [BR:pecq03400]     AD017_19355 Enzymes [BR:pecq01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.2  DNA ligase (NAD+)      AD017_19355 DNA replication proteins [BR:pecq03032]  Prokaryotic type   DNA Replication Elongation Factors    Elongation factors (bacterial)     Other elongation factors      AD017_19355 DNA repair and recombination proteins [BR:pecq03400]  Prokaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     DNA ligase      AD017_19355    NER (nucleotide excision repair)     GGR (global genome repair) factors      AD017_19355    MMR (mismatch excision repair)     DNA ligase      AD017_19355   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      RecET pathway       AD017_19355 SSDB OrthologParalogGFIT Motif Pfam:  DNA_ligase_aden OB_DNA_ligase Nlig-Ia HHH_2 BRCT DNA_ligase_ZBD PTCB-BRCT Auto_anti-p27 SnoaL_2 Motif Other DBs NCBI-ProteinID:  ALL84827 LinkDB All DBs Position 4128915..4131338 Genome browser AA seq 807 aa AA seqDB search MSYPAANLLSVSSQTDEQARERHAQLAAEVADHQFRYYVLDAPVVSDGQFDELWHELLGL EDAHPGLATPQSPTQKVGGTFSTEFTAHDHLERMLSLDNAFSADDLRTWQERVTREVGEN LHYLCELKIDGLAVNLLYEGGTLTRALTRGDGRTGEDITLNMRTLGEVPVTLTGTDEFPV PALVEVRGEVYFRLEDFDRLNASLVEAGKEPFANPRNTAAGSLRQKDPRVTASRNLRLIC HGIGRRDGFTPVTQSQAYDALVAWGLPISPRTRVLRGIEKVVEFVEHWGEHRHDVEHEID GVVVKVDEVALQRRLGATSRFPRWAIAYKYPPEQATTRLLDIRVNVGRTGRVTPFAVMEP VKVAGSTVEMATLHNADEVRRKGVLIGDRVVIRKAGDVIPEVLGPVTDVRDGSERAFVMP THCPECGTALVQQKAGDVDRRCPNARSCPAQLRERLFHVAGRGSFDIEGLGYEAAVALLT SGVLTDEGDVFSLTEDELLRTDLFRNQKGELTVNGRKLLTNLEAAKDRPLWRVLVGLSIR HVGPTAAQALAREFGSMEALEQAAARAKEDTEAAGVEIVSDGSAGEEAPAVPVTGDAAVD EAPTGDAPADEVPAGDAPADEAPAAAGGDGPSAAGAAAEAEGDAEAAVADAEKQERAAVR ARAKAVAEALAPIAGVDGVGPTIAAAVRDWFSVDWHREVVEKWRASGVRMEDEVDDSVPR FLEGLSIVITGSMDTWSRDEAKEAIMARGGRAAGSVSKKTAFLVAGEAPGSKFDKATELG VPVLDEAGFRILLDRGPDAAREHASAG NT seq 2424 nt NT seq  +upstreamnt  +downstreamnt ctgtcgtaccccgcggctaacctgctcagcgtgagttcccagaccgacgagcaggcccgc gagcggcacgcgcagctggccgccgaggtggccgaccaccagttccggtactacgtgctg gacgcgcccgtcgtgtccgacggccagttcgacgagctctggcacgagctgctcgggctg gaggacgcccatcccgggctggcgacgccgcagtcgccgacccagaaggtcggcggcacc ttctccaccgagttcaccgcgcacgaccacctcgagcggatgctctcgctcgacaacgcc ttctccgccgacgacctgcggacctggcaggaacgggtcacccgcgaggtcggcgagaac ctgcactacctctgcgagctcaagatcgacgggctggcggtgaacctgctctacgagggc gggacgctcacccgcgcgctgacccggggcgacgggcgcaccggcgaggacatcacgctg aacatgcgcaccctcggagaggtgccggtcacgctcaccgggaccgacgagttcccggtg ccggccctggtcgaggtccggggcgaggtctacttccggctggaggacttcgaccggctc aacgcctccctggtcgaggcgggcaaggagccgttcgcgaacccccgcaacaccgcggcc gggtcgctgcgccagaaggacccgcgggtcaccgcgtcgaggaacctgcggctgatctgc cacgggatcggccggcgggacgggttcaccccggtcacccagtcccaggcctacgacgcg ctggtcgcctggggcctgccgatctcgccgcgcacgcgggtgctgcgggggatcgagaag gtggtggagttcgtcgagcactggggcgagcaccggcacgacgtcgagcacgagatcgac ggcgtcgtggtcaaggtcgacgaggtcgcgctgcagcgcaggctcggcgcgacgtcgcgg ttcccgcgctgggcgatcgcctacaagtacccgccggagcaggcgaccacgaggctcctc gacatccgggtcaacgtcgggcggaccgggcgggtcaccccgttcgcggtgatggagccg gtcaaggtcgccgggtcgacggtcgagatggcgaccctgcacaacgccgacgaggtgcgc cgcaagggcgtgctgatcggcgaccgggtggtcatccgcaaggcgggggacgtgatcccg gaggtgctcgggccggtcaccgacgtccgcgacggttccgagcgggcgttcgtgatgccg acgcactgccccgagtgcggcaccgccctggtgcagcagaaggcgggcgacgtcgaccgt cgctgcccgaacgcccggtcctgcccggcgcagctgcgcgagcggctgttccacgtggcg gggcggggctcgttcgacatcgaggggctcggctacgaggccgccgtcgcgctgctcacc tccggggtgctgaccgacgagggcgacgtcttctccctcaccgaggacgagctgctgcgg accgacctgttccggaaccagaagggcgagctgacggtcaacggccgcaagctgctcacc aacctggaggccgcgaaggaccgtccgctgtggcgggtgctggtcgggctctcgatccgg cacgtcggcccgaccgccgcccaggcgctcgctcgcgagttcggctccatggaggcgctc gagcaggccgcggcccgggcgaaggaggacaccgaggcggccggcgtcgagatcgtctcg gacggctccgcgggcgaggaagcaccggccgtcccggtcaccggcgacgccgccgtggac gaggcccccaccggcgacgccccagcggacgaggtccccgccggcgacgcccccgcggac gaggcccccgctgcggccggtggcgacgggccgtccgccgcgggcgccgcggccgaggcg gagggcgacgccgaggccgccgtcgccgacgcggagaagcaggagcgggccgccgtgcgc gcccgcgcgaaggccgtcgccgaggcactggccccgatcgccggggtggacggcgtcggc ccgaccatcgccgccgccgtgcgggactggttctccgtcgactggcaccgcgaggtcgtg gagaagtggcgggcgtccggtgtgcggatggaggacgaggtcgacgactccgtcccgcgg ttcctggagggcctgtcgatcgtgatcaccgggtcgatggacacgtggtcccgcgacgag gccaaggaggcgatcatggcccgcggcgggcgcgccgccgggtcggtgtcgaagaagacc gcgttcctcgtcgccggggaggccccggggtcgaagttcgacaaggcgacggagctgggc gtcccggtgctcgacgaggcaggcttccggatcctgctcgaccgcggcccggacgcggcg cgggaacacgcctccgccgggtga

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