Candidatus Phaeomarinobacter ectocarpi: BN1012_Phect454 Help Entry BN1012_Phect454   CDS       T09856                                  Name (GenBank) DNA ligase   KO K01972   DNA ligase (NAD+) [EC:6.5.1.2] Organism pect  Candidatus Phaeomarinobacter ectocarpi Pathway pect03030   DNA replication pect03410   Base excision repair pect03420   Nucleotide excision repair pect03430   Mismatch repair Brite KEGG Orthology (KO) [BR:pect00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     BN1012_Phect454    03410 Base excision repair     BN1012_Phect454    03420 Nucleotide excision repair     BN1012_Phect454    03430 Mismatch repair     BN1012_Phect454  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:pect03032]     BN1012_Phect454    03400 DNA repair and recombination proteins [BR:pect03400]     BN1012_Phect454 Enzymes [BR:pect01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.2  DNA ligase (NAD+)      BN1012_Phect454 DNA replication proteins [BR:pect03032]  Prokaryotic type   DNA Replication Elongation Factors    Elongation factors (bacterial)     Other elongation factors      BN1012_Phect454 DNA repair and recombination proteins [BR:pect03400]  Prokaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     DNA ligase      BN1012_Phect454    NER (nucleotide excision repair)     GGR (global genome repair) factors      BN1012_Phect454    MMR (mismatch excision repair)     DNA ligase      BN1012_Phect454   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      RecET pathway       BN1012_Phect454 BRITE hierarchy Motif Pfam:  DNA_ligase_aden DNA_ligase_OB HHH_2 BRCT DNA_ligase_ZBD PTCB-BRCT HHH_5 FdhE Lar_restr_allev Motif Other DBs NCBI-ProteinID:  CDO58668 LinkDB All DBs Position complement(2140214..2142337) Genome browser AA seq 707 aa AA seqDB search MSAAKSGDPASIKVLDLTEDQAAQELERLAHEIAAHDEAYHHDDKPVISDADYDALRKRN TQIEKCFPALIREDSPSGRVGAAPSEKFDKVQHAVAMLSLGNAFTDDDVKEFGLRVSRFL GLKPDEELAYTAEPKIDGLSASLRYEKGALVMAATRGDGSEGENVTRNVQTIKDIPQTLA TKSPPDVFEVRGEIYMSHAAFAALNEQQVEAGKDPFANPRNAAAGSLRQLDPTITASRPL QFFAYAWGEVSDLPVETQDEAVQLLGSYGFPVNPLMKRCTSTMDMIAHYHAIEEQRSSLG YDIDGVVYKVDRLDWQARLGFVTRSPRWAIAHKFPAEQAITVLNDIEIQVGRTGALTPVA KLEPVTVGGVVVSNATLHNEDEIARKDIRIGDTVVVQRAGDVIPQVVRVLTEKRNGKEVA FKPLSVCPVCGSHAVRDINEKTGKEDVVRRCTGGLICEAQLVQRLKHFVARNALDIDGLG AKQVDAFHGLGWLHSPADIFKLNSHAEEVKKMEGWGETSVSNLMAAIDARREPDLGRLIY GLGIRHVGATTGRLMARSYGTFEAFMSAMIAAGEDREGAAYQELVGIDGVGDVVADALVE FFNEARNREVIDALLAEVTPQEAEAVVADGSPVAGKTLVFTGTLEKMSRAEAKARAESMG AKVSGSVSAKTDLLIAGPGAGSKLKKAESLGVEVIDEDAWIEMAGQN NT seq 2124 nt NT seq  +upstreamnt  +downstreamnt gtgagtgcagccaagtccggcgaccctgctagcatcaaggtgctggacctcaccgaagac caggctgcacaggagcttgagcgtctggcgcatgaaattgcggcgcatgacgaggcgtac catcacgacgacaaaccggtcatctctgacgcggattatgatgccctgcgcaagcgcaac acgcagatagagaaatgctttccggcgcttatccgcgaagattctccatccggccgtgtg ggcgcggcaccatccgaaaagttcgataaggtccagcacgctgtggccatgctctcgctt ggtaacgcgttcaccgatgacgacgtgaaagagtttggcctgcgggtcagtcggtttttg ggcctgaaaccggatgaggaacttgcctatacagccgaacccaagatcgacggcctgtcg gccagcctgcgctacgaaaaaggcgcgttggtgatggcggccacccgtggcgacggctcc gagggtgaaaacgtcacccgcaatgtgcagaccatcaaggacattccccagacgctggca acaaaatcaccgccggatgtttttgaggtgcgtggtgagatttacatgagccatgcagcc tttgccgcattgaacgagcagcaggtggaagcgggcaaggatccgtttgccaatccacgc aatgccgcggcaggctctttgcgtcagctggacccgacaatcacagcgtcacgtccgctg cagttttttgcctatgcgtggggggaggtgtctgaccttccagttgagacccaggatgaa gccgttcaattgcttggcagttatggctttccggtcaatccgctgatgaagcgatgcacc agcacaatggacatgatcgctcactaccatgccattgaagaacagcgctcgtcgcttggc tatgacattgacggcgtcgtctacaaggtggaccggctcgactggcaggcgcgactgggc tttgtcacgcgcagcccgcgctgggccattgcccacaagtttcccgctgagcaggcgatt actgttctcaatgacatcgagattcaggtcggacgtaccggtgccctgacaccggtagcg aaacttgaaccggtgacagttggtggcgtcgtggtgtccaatgcgacgctccacaatgaa gacgagattgcccgaaaggacattcgcattggcgacactgttgttgtgcagcgggcagga gacgttattccgcaggttgtgcgtgtcctcacggagaagcgcaacggtaaggaagttgcc ttcaagcccctgtcggtctgtcctgtatgcggaagccatgcggtgcgtgacatcaacgaa aagaccggcaaggaagacgtggtgcgtcgctgcacgggtggtcttatctgtgaggctcag cttgttcagcggctgaagcattttgtcgcgcgcaatgcgctggatattgatggcctgggt gccaagcaggtggatgcgtttcatggcctcggctggctgcatagcccggcagatatcttc aagctcaatagccacgcggaagaggtcaaaaaaatggaggggtggggcgagacatccgtt tccaacctcatggctgccattgatgcacggcgcgaacctgaccttggacgcctgatttat ggtctgggcattcgtcacgttggcgcaacgacaggtcgattgatggcgcgcagctatggc acgttcgaggccttcatgtcggccatgattgcggcgggagaagaccgcgaaggtgcagcc tatcaggagcttgttggaatcgacggcgttggtgacgtggttgccgatgcgcttgtggag tttttcaatgaggcccgcaatcgtgaggtgatcgatgcgctgctcgcagaggtaacgccg caagaggcagaggcggttgttgctgacggatcacctgtggccggcaagacgctggtcttt accggcacacttgaaaaaatgtcccgggctgaagccaaggcgcgggcggaatccatgggc gccaaggtgtcgggctctgtatccgccaagacggacctgttgattgccgggccaggcgcg ggatcgaagctcaagaaggcggagagcctgggtgttgaggtcatcgatgaagatgcctgg atcgaaatggccggccagaattag

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