Pedobacter terrestris: ACJVDH_00550
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Entry
ACJVDH_00550 CDS
T11837
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
peda Pedobacter terrestris
Pathway
peda01501
beta-Lactam resistance
peda01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
peda00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
ACJVDH_00550
01503 Cationic antimicrobial peptide (CAMP) resistance
ACJVDH_00550
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
peda02000
]
ACJVDH_00550
01504 Antimicrobial resistance genes [BR:
peda01504
]
ACJVDH_00550
Transporters [BR:
peda02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
ACJVDH_00550
Antimicrobial resistance genes [BR:
peda01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
ACJVDH_00550
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
XZP79120
LinkDB
All DBs
Position
complement(94161..97337)
Genome browser
AA seq
1058 aa
AA seq
DB search
MLKKFIERPVLSTVISIIIVILGVLGLATLPVSQYPEIAPPTVQVSTSYQGANADVVMNS
VVVPLEEQINGVEDMTYMTSTASNDGSATITINFKLGTNPDLAAVNVQNRVARATSLLPA
EVTKSGVITAKRQASNVLIFAIYSDNKSFDQTFLQNYANINIIPQIKRINGVGDASAFGT
LDYTMRIWLKPDVMATYGLVPEDVNTALAEQNVEAAPGQFGELGDQAFQYTLKYTGRLKD
ETEFSNIIIRANANGQTLRLKDVARIELGAQSYASSVRFDGKAALGIAINQTAGSNAKEV
IENSIKTLEEAQKTFPNGVHYATLVDVNDFLDASIEKVIHTLVEAFILVFLVVFIFLQDF
RSTLIPAISVPVAIVGTFFFLSLFGFTINLLTLFALVLAIGIVVDDAIVVVEAVHAKLDE
GYTDAKKATIDAMDEISGAIISITLVMAAVFIPVSFISGSSGVFYKQFGLTLAISIILSA
INALTLSPALCALFLKPHADDHEKSKNFLQRFYGAFNTAFDSVTAKYKKSVSFLSRAKWI
VGVAIVVFTAVLVWTMSTTPKGFVPNEDLGTIMSDISLPASTSQEGTNLVIAQIDSIVHT
IPEIKNSLRVVGRSLISGSGSSYGMVIARLHPWDERKRDVKAIIGELFAKTASIKGAKII
FFAPPTIQGFGTSGGFEFQLQDKTGGDINKFNDIGNSFLAALNKRPEIQYAATSFNPSFP
QYQIEVNVAKVKQAGLTVTDVLGVLQGYYGGVYASNFNKFGKQFRVMYQADAQFRANEQS
LTSIYVRNSSGTMAPVSEFIKLTKVYGPQAISRFNLFTSISITGNPNPGYSSGDALTAVQ
EEAAKTLPAGYGYEFSGLSREEISSGSQTIFIFLLCVIFVYFLLAAQYESYILPFAVLIS
LPVGLAGVFVFDKIFGIDNNIYTQITLIMLVGLLAKNAILIVEYAVDRRRKGMSIVNSAI
DGATARLRPILMTSFAFILGLLPLMLSSGVGAAGNKSIGTGAVGGMLIGTIFGVFVIPAL
FIIFQSLQERVSNKSPFNEGVDHEQSEEEYKLATTSKH
NT seq
3177 nt
NT seq
+upstream
nt +downstream
nt
atgcttaagaaatttatagagaggccggttttatctacggtaatatccatcattattgta
attctgggggttttaggcttagccacacttccggtatcgcaatatcccgagattgctccg
cctaccgtacaagtatctacatcttaccagggcgcaaatgccgatgtggtaatgaatagt
gtagtagttccgcttgaggagcaaataaatggtgtagaagatatgacatacatgacctct
acagcaagtaatgacggttctgcaaccattacaatcaactttaagttgggtacaaacccg
gatttggctgcagtaaacgtacagaacagggttgcacgtgcaacaagtttacttcctgca
gaggttacaaaatctggtgtaatcacagcaaaaagacaggcaagtaacgtattgattttc
gctatttacagtgacaataaatctttcgatcaaactttccttcaaaattacgccaacatc
aacatcattcctcaaattaaacgtattaatggtgtgggtgatgcaagtgctttcggtacg
ctggattacaccatgcggatctggttaaaaccagatgtaatggcaacttacggtttggtg
ccggaagatgtgaacactgcacttgctgagcaaaacgtagaagcagctccgggccaattt
ggtgaacttggagaccaggcttttcaatatacgctaaaatatacaggtcgtttaaaagac
gaaactgaatttagcaacatcattatccgtgcaaatgcaaacggacaaaccttgcgtcta
aaagacgttgcacgtatagaactgggtgcacaaagttatgccagtagtgtacgttttgat
ggcaaagccgcattgggtattgccattaaccaaactgccggatctaacgcaaaggaagta
atcgaaaactcaatcaaaaccttggaagaagcacaaaaaactttcccaaacggcgttcac
tacgctacattggttgatgtgaatgatttccttgatgcatcaatcgaaaaagtaattcac
accttggtagaagcgtttatcctcgttttccttgtagtgttcattttccttcaggatttc
cgttctaccttaattccagcaatcagtgttccggtggctattgtaggtacttttttcttc
cttagtcttttcggttttaccatcaatttattaactcttttcgccctcgtactcgccatt
ggtattgtggtagatgatgcgattgttgtggttgaggcggtgcacgccaagctggatgaa
gggtataccgatgctaaaaaagcaactattgatgcgatggacgaaatcagcggagcaatt
atatcgattacgttagtcatggcggctgtatttattccggtgagttttatctccggatct
tctggtgtattctataaacaattcggtttaacactggctatttccatcatcctttcggcc
attaacgctttaacattaagtcctgctttgtgtgcattgttccttaagccacatgcagac
gaccatgaaaaatctaaaaatttcttgcaacgtttttacggtgcttttaatacagctttc
gatagtgtaactgcgaaatataaaaaatcagttagctttttgtctcgtgcaaaatggatt
gttggtgttgcaattgtggtatttactgccgttttggtttggacaatgagtacaacacct
aaaggttttgtgcccaatgaagatttaggtacaattatgtctgacatttccttgccggct
tcaacttcacaggaagggacaaatctggtaattgcgcaaattgacagtatcgtacatact
attccggaaattaaaaactctcttagagttgtggggagaagtctgatcagtggttctgga
agttcttacggaatggttatcgcaaggttacatccatgggatgaaagaaaacgtgatgtt
aaagccatcatcggcgagttgtttgctaaaacagcaagcattaaaggtgcaaaaatcatc
ttctttgctccaccaaccattcagggttttggtacaagtggaggttttgaattccagctt
caggataaaacaggtggcgatatcaataaattcaacgatatcggaaattcctttcttgca
gcgctgaacaagcggcctgaaattcaatacgctgcaacttcatttaatccaagctttcct
caatatcaaattgaggtaaatgttgcgaaagtgaaacaggcaggtttaacggtaacggat
gttctgggtgttttacaaggttattatggtggtgtttatgcatctaactttaataaattc
gggaaacaattcagggtaatgtatcaggccgacgcacaattcagagccaacgaacaaagt
ttaacaagcatctacgtgcgcaattcgagcggtacaatggctccggtttctgaatttatt
aagctgacaaaagtttacggacctcaggcaatctcgcgtttcaacttatttacttcaatt
tctattactggtaacccgaatcctggatacagctcaggagatgctttaaccgcagtacaa
gaagaagctgcgaaaacacttccggcaggttatggttatgaattctctggattatcccgt
gaggagatcagcagtggtagtcaaaccattttcatctttttactttgcgtaatttttgtg
tatttcttacttgccgcacaatatgaaagttatatcctgccttttgcagtattgatttca
ctacctgttggtttggccggtgtatttgtttttgacaaaatcttcggaatcgataacaac
atctatacacaaattacattaattatgcttgtaggtctattggccaaaaatgcaattcta
attgtagagtacgcagtggatagacgtagaaaagggatgagtattgtaaactcggcaatt
gatggtgcaacggcacgtttaagaccgattttgatgacttcttttgcatttatcctcgga
ttattgccattgatgttatccagcggcgtaggtgcagccggaaataaatcaattggtaca
ggtgctgttggtggtatgttaattggaacaattttcggagtatttgtgatcccggcgtta
tttatcatattccaaagtttacaggaaagagtaagtaataagtctccattcaatgaaggt
gtagaccacgagcaaagtgaagaagaatataaattggctactaccagcaaacattaa
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