Pedobacter paludisoli: ACJVDK_07190
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Entry
ACJVDK_07190 CDS
T11855
Name
(GenBank) pyridoxal-phosphate dependent enzyme
KO
K01697
cystathionine beta-synthase [EC:
4.2.1.22
]
Organism
pedm Pedobacter paludisoli
Pathway
pedm00260
Glycine, serine and threonine metabolism
pedm00270
Cysteine and methionine metabolism
pedm00670
One carbon pool by folate
pedm01100
Metabolic pathways
pedm01110
Biosynthesis of secondary metabolites
pedm01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
pedm00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
ACJVDK_07190
00270 Cysteine and methionine metabolism
ACJVDK_07190
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
ACJVDK_07190
Enzymes [BR:
pedm01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.22 cystathionine beta-synthase
ACJVDK_07190
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PALP
CBS
Motif
Other DBs
NCBI-ProteinID:
XZQ05704
LinkDB
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Position
complement(1811909..1813270)
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AA seq
453 aa
AA seq
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MWYNNILETIGNTPLVKLNSITKGIPATVLAKIETTNPGNSIKDRMALKMIEDAEKSGKL
KPGGTIIEGTSGNTGMGLAMAAIIKGYKCIFTTTDKQSKEKVDALRAFGAEVIVCPTNVE
PEDPRSYYSVSSRLEREVPNSWKPNQYDNLANSEAHYEQTGPEIWEQTEGKITHLVVGVG
TGGTISGAGRYLKEKNPAIQVWGIDTYGSVFKKYKETGIFDKDEIYPYITEGIGEDFLPA
NVNFDVIDLFEKVTDKDAALMTRDVTRKEGIFVGNSAGAAVAGLLQLKDKLKPEDVVVVI
FHDHGSRYMGKMYNEDWLRERGFLQDEKLTAKSILAKKESAEIVTLDEQKTVLEAINTIK
SMNISQIPVTQKGMIVGKVAESDILSALLENPSLKSAPVAEIMTGTFPFVDLNTSIDKIS
SLINKENSAVLVEDELGKIEIITQYDVINAISG
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgtggtacaacaatattttagaaacgattggcaatacgccattggtaaaattaaactcg
ataacaaagggaattccggccacagttttggcaaaaattgaaacaacaaatccgggtaac
tccatcaaagaccgtatggcgcttaagatgattgaggacgcggaaaagagtggaaagtta
aagccaggtggtaccattatcgagggaacttcaggaaacactggtatggggcttgctatg
gcggctattattaaagggtataaatgtatttttacaaccacggataagcaatcgaaagag
aaagtagatgccttgcgtgcttttggtgctgaagtaattgtttgtcctaccaacgttgaa
cctgaagatccacgttcttattattctgtttcatcgcgtttagagcgagaggtgcctaat
tcatggaaaccaaatcaatatgataatttagcaaattcagaagcgcattacgagcaaact
ggtccggaaatttgggaacaaacggaaggtaaaattacccatttggttgtgggagtagga
accgggggtacgatttcgggtgctggaagatatttgaaagagaaaaatcctgctatacaa
gtttggggaattgatacatacggttcggtttttaagaaatacaaagaaacaggcattttc
gataaagatgagatttatccttacatcacagaaggcattggggaagattttctacctgcg
aatgtgaattttgatgtaattgatttatttgaaaaggtgaccgataaagatgccgcttta
atgacccgagacgttacacgtaaagaaggtatttttgtaggcaattcggccggagctgcg
gttgcaggcttgttgcaattgaaagataaattaaagccagaggacgttgtagtggttatt
tttcacgaccacggaagtcgctacatggggaaaatgtacaacgaagattggttacgcgaa
cgcggtttcttacaagatgaaaagctaacggcgaaatcgattcttgccaaaaaggaaagt
gccgaaattgtaacacttgatgagcagaagacggtattagaagcgattaataccattaaa
tcaatgaatatctcgcaaattccagttacgcagaaaggaatgattgtaggtaaagttgcg
gaaagtgatattttatcagcgttacttgaaaacccgagcttaaaatcggcacccgttgcc
gaaattatgacaggtactttccctttcgttgatttgaatacctccattgataaaatatcc
tcgttaattaataaagaaaattcggcggtgttggtggaggatgagctaggtaaaattgaa
attattacgcagtacgacgttatcaacgctatttcaggttaa
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