Pedobacter sp. WC2423: AB3G38_04075
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Entry
AB3G38_04075 CDS
T10715
Symbol
crtI
Name
(GenBank) phytoene desaturase family protein
KO
K10027
phytoene desaturase [EC:
1.3.99.26
1.3.99.28
1.3.99.29
1.3.99.31
]
Organism
pedo Pedobacter sp. WC2423
Pathway
pedo00906
Carotenoid biosynthesis
pedo01100
Metabolic pathways
pedo01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
pedo00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
AB3G38_04075 (crtI)
Enzymes [BR:
pedo01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.99 With unknown physiological acceptors
1.3.99.26 all-trans-zeta-carotene desaturase
AB3G38_04075 (crtI)
1.3.99.28 phytoene desaturase (neurosporene-forming)
AB3G38_04075 (crtI)
1.3.99.29 phytoene desaturase (zeta-carotene-forming)
AB3G38_04075 (crtI)
1.3.99.31 phytoene desaturase (lycopene-forming)
AB3G38_04075 (crtI)
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Gene cluster
GFIT
Motif
Pfam:
Amino_oxidase
NAD_binding_8
DAO
GIDA
Pyr_redox_2
HI0933_like
Pyr_redox
FAD_oxidored
Thi4
FAD_binding_2
MCRA
3HCDH_N
MurD-like_N
AlaDh_PNT_C
NAD_binding_9
FAD_binding_3
NAD_Gly3P_dh_N
UDPG_MGDP_dh_N
Pyr_redox_3
NAD_binding_2
Motif
Other DBs
NCBI-ProteinID:
XDC12026
LinkDB
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Position
complement(1059420..1060925)
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AA seq
501 aa
AA seq
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MPTKTAQSLPKIAVIGAGFAGISAAAYLAKNGYKVDVYEKNSTVGGRARQMETENGYVFD
MGPSWYWMPDVFEKFFNDFGYQAKDFYELELLDPGFSVVYGQNDVLDIPADFNALCETFE
AIEPGSAVKLQQFLDEAAYKYKTGIEKLVYKPGLSLLEFADMDLLKGVFKLQVFTSFSSH
VKKYFKHPKLIALMEFPVLFLGATPEDTPALYSLMNYAGLKLGTWYPKGGFGKVIEAMKT
VAEKNGVKFHLDEPVSALKIEGKQIKSLSSSKQTKVYDGYIAAADYHHVEEKLLGENYRN
YQEKYWDKRVLAPSCLIFYLGVTKKTERLGHHTLFFDEDLKQHAIEIYKEPQWPSKPLFY
VCCPSRTDPAVAPDGHENLFVLMPLATNMEDTEALREQYFELIMTRLETYTGVEIRKYLD
YKSSYCVADFKLDYNSYKGNAYGLANTLMQTANLKPSLKNKKVENLFYAGQLTVPGPGVP
PSIISGHVAASQLIKYFNKNL
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atgccaactaaaacagcacagtccttacccaaaatagcagtgataggtgccggatttgct
ggcatcagtgcggcagcttaccttgccaaaaatggttataaagtggatgtatatgaaaaa
aacagtactgtaggtggccgggcaagacaaatggaaactgaaaacggttatgtttttgac
atggggccaagctggtactggatgccagatgtctttgagaaattctttaacgattttggt
tatcaagccaaagatttttatgaactggagcttcttgatcccggtttttcagttgtatac
gggcaaaacgatgtccttgatattccagcagattttaacgcactctgtgaaacttttgaa
gccattgaaccaggaagtgcggtaaagcttcagcaatttctggatgaggcagcttataaa
tataaaaccggaattgaaaaattagtttataaaccaggcctgtctttattggaatttgcg
gatatggatctactgaaaggggtttttaagctacaagtattcacctctttcagcagccat
gttaaaaaatattttaagcacccgaaacttattgcactaatggaattcccagtcttgttt
cttggtgcaacacccgaagatacgcctgcgttatacagtttgatgaattatgcaggttta
aaactaggcacatggtatcctaaaggtggatttggaaaagtgattgaggccatgaaaaca
gttgctgaaaagaatggtgtaaaattccacttagatgaacccgtttctgctttaaaaatt
gagggaaaacaaattaagagcctgagctcttccaaacagacaaaagtctatgacggatat
attgctgctgccgattaccatcacgtagaggaaaaactacttggcgaaaactatagaaat
taccaggagaaatactgggataaacgtgttctggcgccgtcctgtctcattttctatttg
ggtgtaaccaagaaaacagaacgtttaggtcatcacaccttattctttgatgaagacttg
aaacaacatgctattgaaatttacaaagagccacaatggccttctaaacccttattttat
gtctgctgcccatcaagaacagaccctgctgtagcaccagatggacatgaaaacctattt
gtattaatgcctctggcaacaaatatggaagatacagaagcactaagggaacaatatttt
gagctgattatgacacgtctggaaacttataccggcgttgaaatccgtaaatacctcgat
tataagagcagttattgtgtagcagactttaaactggattataactcttacaaaggtaac
gcttacggtttagcgaacacattaatgcaaactgctaacctgaaaccttcattaaaaaac
aaaaaggttgaaaacctgttttatgcaggccagcttactgtaccaggaccaggagttcct
ccatccattatttcaggccatgtggctgccagtcaactgataaaatactttaataaaaac
ctatga
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