Pedobacter sp. WC2423: AB3G38_04640
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Entry
AB3G38_04640 CDS
T10715
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
pedo Pedobacter sp. WC2423
Pathway
pedo01501
beta-Lactam resistance
pedo01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
pedo00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
AB3G38_04640
01503 Cationic antimicrobial peptide (CAMP) resistance
AB3G38_04640
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pedo03036
]
AB3G38_04640
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pedo02000
]
AB3G38_04640
01504 Antimicrobial resistance genes [BR:
pedo01504
]
AB3G38_04640
Chromosome and associated proteins [BR:
pedo03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
AB3G38_04640
Transporters [BR:
pedo02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
AB3G38_04640
Antimicrobial resistance genes [BR:
pedo01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
AB3G38_04640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BSH_RND
RND-MFP_C
HH_MFP_RND
YknX_C
Beta-barrel_RND
BSH_CusB
Biotin_lipoyl
BSH_YknX
HH_EMRA
BSH_CzcB
HH_YBHG
Beta-barrel_RND_2
HH_AprE
HH_CzcB
Motif
Other DBs
NCBI-ProteinID:
XDC12138
LinkDB
All DBs
Position
1234886..1236049
Genome browser
AA seq
387 aa
AA seq
DB search
MKTSIQIGLLFLTGLTLASCGNDKNKAAQAAAAAGQVKEYKVLKLEPRSATLNTDYPASI
QGQQNIEIRPRVDGYIDKIFVDEGAVVKIGQPLFKISAPQYEQEVRTANASIANAMAQLN
AAKLAINKVKPLVEKDIVSKYELESAQYTYESAQAAVATAKASLVNAKTNLGFTTVTSPV
NGVVGSIPFRLGSLVSSTTADPLTTVSSIGNVYAYFALNEKILLDFTKDGSGSFAQKLAR
LPKVSLLLSDGSTYTEQGRIETVNGLINTATGSANIRARFPNPKGIIRSGSSATVRIPNA
VKDAILVPQSATFELQDKRFVVVVGQDGKTKNVAVTVMENTAGNFFVVESGLKAGDQIVL
EGVATLKDGTQIKANAENPETVYADLK
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacatcaatacagattgggctcctgttccttacaggattaaccctcgcctcatgt
ggcaacgataaaaataaagcggcacaggccgcagccgcagccgggcaggttaaggaatac
aaagtcctgaaactggaacccagatctgctacattaaatacagactatcctgcaagtata
caagggcagcagaatatcgaaatcagaccaagagtggacggatatatcgacaaaatattt
gtggatgaaggtgctgttgtaaagattggtcagccattattcaaaatcagcgcaccacaa
tacgagcaggaggtaagaacagcaaatgccagtatcgccaatgcgatggcacagctgaat
gctgcaaaactggcaatcaacaaagtaaagccgctggtagaaaaagatattgtaagtaaa
tatgagctggaatcagcacaatatacttatgaatctgcgcaggcagcagtagcgactgcg
aaagccagtttggttaatgctaaaacaaatttaggcttcactacagtaactagtcctgtg
aatggggtagtaggttctattccatttcgtttaggaagcctggtgagcagcaccactgcc
gatcctttaactacagtttcgagtataggtaatgtatatgcttattttgcactgaacgaa
aaaatattgttagactttactaaagatggtagtggttctttcgcacagaaactagccaga
ctccctaaagtttccttattgctttctgacggatctacttatactgaacaaggccgtata
gaaacagtcaacgggttaatcaatacagctacaggttcagcaaatatcagggcccggttc
cctaatcctaaaggtattatccgcagtggaagcagtgcaacggtaagaattcctaatgcg
gtgaaagatgcaatcctggttcctcaaagtgcaactttcgaattacaggataaacgtttt
gtggtcgttgttggacaggatggcaagactaaaaatgttgcagtaacggtgatggaaaat
accgcaggtaatttcttcgtggtcgaaagcggcttaaaagcaggagatcaaattgtatta
gaaggggtagcaaccctaaaagacggcacgcagatcaaagcgaatgccgaaaacccggaa
actgtctacgcagacttaaaataa
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