Pedobacter sp. WC2423: AB3G38_13565
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Entry
AB3G38_13565 CDS
T10715
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
pedo Pedobacter sp. WC2423
Pathway
pedo03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pedo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AB3G38_13565 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pedo03400
]
AB3G38_13565 (nth)
Enzymes [BR:
pedo01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
AB3G38_13565 (nth)
DNA repair and recombination proteins [BR:
pedo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
AB3G38_13565 (nth)
Prokaryotic type
AB3G38_13565 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
RecR_HhH
EndIII_4Fe-2S
HHH_5
DUF763
HHH_8
Motif
Other DBs
NCBI-ProteinID:
XDC08986
LinkDB
All DBs
Position
3295990..3296658
Genome browser
AA seq
222 aa
AA seq
DB search
MLKKERYKQFVAYFSAKQPDAETELHYNNPFQLLVAVILSAQCTDKRINQVTPALFQRFP
NAKALAEVTPDIVFDYIRSVSYPNNKAKHLVGMANMLLNEFNNVVPSDIDQLQKMPGVGR
KTANVIASVIYNAPAMAVDTHVFRVANRIGLTTGKTPLAVEKDLVRYLPEETIHVAHHWL
ILHGRYVCVARSPKCNICEITSICKYYEKLNKPAKAISQEAH
NT seq
669 nt
NT seq
+upstream
nt +downstream
nt
atgcttaaaaaagaaaggtataaacaatttgtagcctatttttctgctaaacagcctgat
gctgaaacagaacttcattacaataacccttttcagctgctggtcgctgtaattttatcc
gcacaatgcaccgataaaagaatcaaccaggttacacccgctttattccagcgcttcccg
aatgcgaaagcactcgcggaagttactccagatattgttttcgactatatcaggagtgta
agttatccgaacaacaaagcgaagcacctggtaggcatggccaacatgctgttgaatgaa
tttaataatgtagttccttcagacattgatcaattgcagaaaatgcccggagtgggcagg
aagacagccaatgtcattgcttcagtaatctacaatgcaccggccatggctgtagacacc
catgtatttcgtgtggccaaccgtattgggttaaccacaggaaaaacaccactggcagta
gaaaaagatctggtcaggtatttaccagaagaaactattcatgttgcccatcactggctg
atccttcatggcaggtatgtatgtgttgcacgttccccgaaatgcaatatttgtgaaatc
acttcgatctgcaaatattatgagaagctgaacaaaccagctaaagctattagccaggaa
gcccattaa
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