Pedobacter sp. WC2423: AB3G38_14425
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Entry
AB3G38_14425 CDS
T10715
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
pedo Pedobacter sp. WC2423
Pathway
pedo01501
beta-Lactam resistance
pedo01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
pedo00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
AB3G38_14425
01503 Cationic antimicrobial peptide (CAMP) resistance
AB3G38_14425
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pedo02000
]
AB3G38_14425
01504 Antimicrobial resistance genes [BR:
pedo01504
]
AB3G38_14425
Transporters [BR:
pedo02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
AB3G38_14425
Antimicrobial resistance genes [BR:
pedo01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
AB3G38_14425
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
EMC4
Col_cuticle_N
Motif
Other DBs
NCBI-ProteinID:
XDC09147
LinkDB
All DBs
Position
3509589..3512702
Genome browser
AA seq
1037 aa
AA seq
DB search
MSISTTSIKRPVLAIVMNLMILLFGVIGYNFLGVREFPNIDPTVVSVRTSYPGANSDIIE
SQITEPLEKSINGIDGIRNMSSSSNQGSSTITIEFNLGKNIEEAANDVRDKVSQAARNLP
KDIDGNPVVSKADANSDAIITMTIQSDKRNQLELSDYAENVIAERIQTIPGVSGVQIQGQ
KKYAMRIRIDPNKLAAYGLTSQDIVTALDNENVELPSGKITGASTELTVKTLGKLTNEKE
FNDLIIKTDSNNVIQLKDVGFAELGPENEETILRESGKPMVAVALIPQPGANYLDISTEF
EKRFARLKNDIPKDIKLNVSLDNTRFIKNSVTEVAETIILSLVLVILIIYLFFRDWAIAI
RPLIDIPVSLVFTFFIMYIFGFSINVLSLLAIVLATGLVVDDGIVVTENIFKKVEEGYSP
FEAAIKGSNEIFFAVISISITLAAVFLPVVFLQGFVGRLFREFGIVIGAAVLISAFVSLT
LTPMLNAYLMKKTGHKKSRFYEWSEPYFVMLNDNYAKNLNKFLDKRWLAIPIIVACAGLI
VLFWKILPKETAPYDDRSAINMSITTPEGASYDYTDQFIMKIAKMVEDSIPEKNVNITIT
SPSFGGSGAVNSGFVRMGLVDPGLRGRSQEEIAAQLTRITRKYTEGKVLVTQQPTISVGR
RGGLPVSYIIQAQNFDKLREKVPQFMDEVGKDPTFTVSDVNLKFNKPEINLTIDRDKARN
LGVSVSAIAQTLQLGLSGQRFSYFFMNGKQYQVIGQFDRGNRKDPLDLSSVYVRNDKGEL
IQVDNLVSAKEESSPPQLYRNNRFTAATVSAGLAPGKSIGDGIAAMDRIRDKVLDETFST
DLSGESRDFQESSSNTMFAFGLALLLVYLILSAQFESFKDPVIIIMTVPMAVAGAFLSLW
LFGQSWNIFSQIGTIMLIGLVTKNGILIVEFANQLKENGKSVHEAIREASVSRLRPILMT
SLAISIGALPIAMALGAAAKSRMGMGVVIVGGTTFSLVLTLFVIPSIYSYWSKEHKTNTD
LQESLKAALAEEKNTSA
NT seq
3114 nt
NT seq
+upstream
nt +downstream
nt
atgagtatatccaccacgagtataaaaagacccgttctggcaattgtaatgaacctgatg
atcctgctgttcggggttatcggatacaattttctgggtgtaagggagttccctaatatt
gacccgaccgtagtttccgtaaggacttcctatccaggtgcaaattcagacattatcgaa
tcgcaaattactgaacccctggagaaatctattaacggaattgacgggatcagaaatatg
tcttcttccagcaatcagggaagcagtaccatcaccatagagttcaacctgggtaaaaat
attgaagaagccgccaatgatgtacgcgataaagtatcacaggctgcccgtaatttacca
aaagatattgatggaaatcctgtagtgagcaaggccgatgccaattcggatgcgattatt
accatgactatccagagtgataaaagaaatcagctggagctaagtgattatgcagagaac
gtaatcgccgaacggatacagacgattccaggagtaagtggcgtacagattcagggacag
aaaaaatatgcgatgagaattcgtattgaccctaataaactggctgcttatggcttgact
tctcaggatattgtcactgcgcttgacaatgaaaacgttgaacttccatctggtaaaatt
actggtgcaagtacggaattaacagttaaaacactcggtaaattaacaaatgagaaagag
ttcaatgacctgattattaaaactgacagcaataatgtgatccagttaaaggatgttggc
tttgccgagcttggtcctgaaaatgaggagactattttaagagaatctggtaaaccgatg
gttgcagtagctttaataccacaaccaggagcaaattatctggacatttcaacagaattt
gagaaacgttttgcacggttaaaaaatgatatccccaaagatattaaactgaatgtttca
ctggataacaccaggtttatcaaaaattcagtaacagaggtagcagaaaccattatcctt
tcgctcgtactcgttatcctgattatctacttatttttcagggactgggcaattgcaatc
cgcccgttgattgacattcctgtatcactggtattcactttctttatcatgtacattttt
ggtttttccattaatgtactgagtttacttgccattgtactggctaccggactggtagtc
gatgatgggattgtggttacagaaaacatctttaagaaggtggaagaaggatattctcct
tttgaagcagcgattaaagggtctaatgaaattttctttgcggttatatctatctccatc
acactggcagcagtattcctgcccgttgtatttttacagggctttgtaggccggcttttc
cgggaatttggaatcgtgatcggcgcagcggtattgatctctgcttttgtatcactgacc
ttaaccccgatgttgaatgcttacctgatgaaaaaaacagggcataagaaatcgaggttt
tatgaatggtctgagccctattttgtgatgctgaatgataactacgcgaaaaacctgaac
aaattcctggataaaagatggctggctattccaatcatcgtagcctgtgcaggccttatc
gtattattctggaagatcttaccgaaagaaacagctccttatgatgacagaagtgcaatc
aatatgagcattactacacctgaaggagcatcttacgattatacggatcagttcattatg
aaaatcgccaaaatggtcgaggactctattccggaaaagaacgtaaatatcacaattacc
tccccgagtttcggcggaagtggtgccgtaaacagtggttttgtcagaatgggcctggtg
gatcctggactgcgtggccgttctcaggaagagattgcagcacagctgacccggatcacc
aggaaatatacagaaggaaaagtattggttacccagcaaccgaccatctctgtaggtcgc
cgtggcggtttaccagtcagttatattatacaggcgcagaattttgataagcttcgcgaa
aaggtacctcagtttatggatgaggtaggtaaagatcctactttcactgtttctgatgtt
aacctgaaattcaataaaccggaaatcaatcttactatagaccgggataaggcacgaaac
cttggggtatctgtgtccgcgattgcacaaactttacaactgggcttaagtggtcagcgc
ttttcttatttctttatgaatggaaagcagtaccaggtgatcggccagtttgaccgtggc
aaccggaaagatccattggatttaagttctgtatatgtaagaaatgataaaggggagctg
atacaggttgacaacctggttagtgcaaaagaagaaagcagcccgccacaattataccgg
aataaccgtttcacagcagcgacagtttctgctggcctggctccgggaaagagtattgga
gatggtattgcggccatggacagaatcagggataaggttttagatgagactttctctacc
gatctgagcggtgaatcccgcgatttccaggagagttcttcaaacacaatgtttgctttc
ggacttgccttattgttagtttacctgattttatctgcacaatttgagagtttcaaagat
ccggttatcatcattatgactgtgcctatggcagtagcgggagcattcctttcgctatgg
ttatttggccagagctggaatatcttcagtcagattggaactatcatgctgattggtctg
gtgacaaaaaatgggattttgatcgtagaatttgcgaatcagctgaaagagaatggtaaa
agtgtacatgaagcgatcagagaggcttctgtttcccgtttaaggccaattttaatgacg
agtctggccatatctatcggtgctctacctattgctatggcattgggtgcggcagcaaaa
agccgtatgggtatgggagttgtaattgtaggcggtacaactttctcattggttcttact
ttatttgtaattccttctatttattcttactggtcaaaggagcataaaacgaatactgat
ttacaagagtccttaaaagcagcattggctgaagaaaaaaatacttcggcttaa
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