Pedobacter sp. WC2423: AB3G38_25015
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Entry
AB3G38_25015 CDS
T10715
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
pedo Pedobacter sp. WC2423
Pathway
pedo01501
beta-Lactam resistance
pedo01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
pedo00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
AB3G38_25015
01503 Cationic antimicrobial peptide (CAMP) resistance
AB3G38_25015
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pedo03036
]
AB3G38_25015
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pedo02000
]
AB3G38_25015
01504 Antimicrobial resistance genes [BR:
pedo01504
]
AB3G38_25015
Chromosome and associated proteins [BR:
pedo03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
AB3G38_25015
Transporters [BR:
pedo02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
AB3G38_25015
Antimicrobial resistance genes [BR:
pedo01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
AB3G38_25015
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
Biotin_lipoyl_2
Biotin_lipoyl
PTS_EIIA_1
UPF0767
Motif
Other DBs
NCBI-ProteinID:
XDC11190
LinkDB
All DBs
Position
complement(5936487..5937614)
Genome browser
AA seq
375 aa
AA seq
DB search
MKTTLIYSCLSACLILSSCGNSKNPQQKEHIQEFPVLSLTPQKADLFAEYPTTLQGEQTV
EIRSKVDGYIEQVYVAEGTIVSKGQPLFKIDANSFQQEMNNKNAAVLAAAANLETASIQT
QRTTILVEKKIVNSFELTSAKNAEQVKKAEFNQAKADLSAAKSKLAYTNIVSPINGVVGS
LPYKIGSLVSSTSETALTTIANTKQIYAYFSLSQQQLGAFLKQYDGQKVNEKFKHMPQVS
LLMQDGEMYGTKGKIETLSGVLNASTGAANFKAVFPNPEGKLWSGASAAIRIPTQLNNAI
MIPKSATFELQGKYFVFKVDQKNIVHHTAIDIMEAVTDKNYVVTKGLTAGDQIVTEGLGN
LKDGMKIKTNPSTPK
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacaacgctaatttactcctgcctttcagcctgcctgattttatcttcctgtgga
aattctaaaaacccgcagcaaaaggagcatatacaagaattccccgttttatctcttaca
ccgcaaaaggccgatctttttgcagaatatccgactaccctgcaaggagaacaaaccgta
gaaatccgttccaaagtagatggttacatagaacaagtttatgtagcagaaggaacaatc
gtgagtaaaggacaacctttatttaaaatagatgccaatagcttccagcaggaaatgaat
aataaaaatgcagccgtgcttgccgctgcagctaacctggaaactgccagcattcaaaca
caaaggacaacaatactggtagaaaagaaaattgtaaactcctttgagcttacttctgct
aaaaatgcagagcaggtaaaaaaagcagagtttaaccaggcaaaagcagatctgtcggca
gcgaagtccaaacttgcttataccaatattgtaagtcctattaacggggttgtaggaagc
ctgccttataaaataggcagcctggtgagcagtacctccgaaactgccctaaccactatt
gccaataccaaacagatctacgcctacttttctctgagtcagcagcagttaggcgcattc
ttaaaacagtacgatggtcagaaagtcaatgaaaagttcaagcatatgccgcaggtatcc
ctattgatgcaggacggtgaaatgtacggcacaaaaggtaaaattgaaacactgagtggt
gtactgaacgcttcaacaggtgctgcaaatttcaaagcagtatttcctaatccagaaggt
aaattatggagtggcgcaagtgcggctatcaggatcccaacccagttaaacaatgcgatt
atgatacctaagtctgcaacattcgaattgcagggtaaatactttgtctttaaagttgac
cagaaaaacatcgttcaccatacagcaattgacattatggaagctgttacagataaaaac
tatgtggtcaccaaaggactgaccgcaggcgaccagatcgttaccgaaggccttggtaat
ttaaaagacggtatgaaaatcaaaaccaatccttcaaccccgaaataa
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