Phycodurus eques (leafy seadragon): 133397145
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Entry
133397145 CDS
T09682
Symbol
cacna1c
Name
(RefSeq) voltage-dependent L-type calcium channel subunit alpha-1C isoform X1
KO
K04850
voltage-dependent calcium channel L type alpha-1C
Organism
pee
Phycodurus eques (leafy seadragon)
Pathway
pee04010
MAPK signaling pathway
pee04020
Calcium signaling pathway
pee04260
Cardiac muscle contraction
pee04261
Adrenergic signaling in cardiomyocytes
pee04270
Vascular smooth muscle contraction
pee04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
pee00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
133397145 (cacna1c)
04020 Calcium signaling pathway
133397145 (cacna1c)
09150 Organismal Systems
09152 Endocrine system
04912 GnRH signaling pathway
133397145 (cacna1c)
09153 Circulatory system
04260 Cardiac muscle contraction
133397145 (cacna1c)
04261 Adrenergic signaling in cardiomyocytes
133397145 (cacna1c)
04270 Vascular smooth muscle contraction
133397145 (cacna1c)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pee04040
]
133397145 (cacna1c)
Ion channels [BR:
pee04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
133397145 (cacna1c)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Ca_chan_IQ
GPHH
CAC1F_C
PKD_channel
Motif
Other DBs
NCBI-GeneID:
133397145
NCBI-ProteinID:
XP_061523684
LinkDB
All DBs
Position
22:complement(4159077..4265734)
Genome browser
AA seq
2323 aa
AA seq
DB search
MLRGLFTRKPKHERLQEEPEVRFKGRLVSETDLGYTYVRPGGSDYSPPHPLPRPSAPGLT
NEHPGVGDRDGSGVNHGVVGVVGLAPEHIATPGAALSWQAAIDAARQAKMMGNAASGGAA
GLAAGGGGPISTASSTQRKRQHYSSKPKKQTTTTATRPPRALLCLTLKNPIRRACISIVE
WKPFEIIILMTIFANCVALAVYIPFPEDDSNATNSNLERVEYLFLIIFTVEAFLKVIAYG
LLFHPNAYLRNGWNLLDFIIVVVGLFSAILEQATKGDGAAPIGGKAAGFDVKALRAFRVL
RPLRLVSGVPSLQVVLNSIIKAMVPLLHIALLVLFVIIIYAIIGLELFMGKMHKTCFHEH
TGTIAEEKPAPCAPDMAYGRHCNHNGTECKMGWEGPNDGITNFDNFAFAMLTVFQCITME
GWTDVLYWVNDAVGYRWPWVYFVTLIIIGSFFVLNLVLGVLSGEFSKEREKAKARGDFQK
LREKQQLEEDLKGYLDWITQAEDIDPENEEEGLDDDKPRNLSMPASENESVNTDNAPGGD
VEGETCCTRLANRISKSKFSRYSRRWNRLCRRKCRAAVKSQVFYWLVIFLVFLNTLTIAS
EHHHQPQWLTDVQDIANKVLLALFTGEMLLKMYSLGLQAYFVSLFNRFDSFVVCGGILET
ILVETKIMSPLGISVLRCVRLLRIFKITRYWNSLSNLVASLLNSVRSIASLLLLLFLFII
IFSLLGMQLFGGKFNFEETRRSTFDNFPQSLLTVFQILTGEDWNSVMYDGIMAYGGPSFP
GMLVCIYFIILFICGNYILLNVFLAIAVDNLADAESLTSAQKEEEEEKERKKLARLGTPD
KRHNNEKPPLEEEKREKIELKSITSDGETNTATKINMDDYCGDESEEKNPYPANDYIGDD
DDEEPDVPVGPRPRPLSDIQLKEKAVPMPKARAFFVFSHTNKFRVLCHKIVNHNIFTNLI
LFFILLSSISLAAEDPVKNDSFRNEILGYADHVFTGLFTMEIILKVRRLYFCSVLHFKSV
LVCHCPLQMTAYGAFLHKGSFCRNYFNILDLVVVSVSLISFGIQSSAINVVKILRVLRVL
RPLRAINRAKGLKHVVQCVFVAIRTIGNIVIVTTLLQFMFACIGVQLFKGKFFTCTDSSK
QTKAECRGSYIKYKDGDVAKPERGLRLWENSEFNFDDVLQGMMALFAVSTFEGWPGLLYR
AIDSHTEDVGPIYNYRVVISIFFIIYIIIIAFFMMNIFVGFVIVTFQEQGEQEYKNCELD
KNQRQCVEYALKARPLRRYIPKNPYQYKVWYVVNSTYFEYLMFTLILLNTICLAMQHHGQ
TKNFNDAMNILNMLFTGLFTVEMILKLIAFKPRGYFSDPWNVFDFLIVIGSIIDVILSEI
NHYFVDAWNTFDALIVVGSFVDIAITEVHGLQNSEENARISITFFRLFRVMRLVKLLSRG
EGIRTLLWTFIKSFQALPYVALLIVMLFFIYAVIGMQMFGKIALRDHTQINRNNNFQTFP
QAVLLLFRCATGEAWQEIMLACAPNRPCEKGSTNENVTVHEDCGSQFAIIYFVSFYMLCA
FLIINLFVAVIMDNFDYLTRDWSILGPHHLDEFKRIWAEYDPEAKGRIKHLDVVTLLRRI
QPPLGFGKLCPHRVACKRLVSMNMPLNSDGTVMFNATLFALVRTALRIKTEGNLEQANEE
LRAIVKKIWKRTSMKLLDQVVPPAGDDEVTVGKFYATFLIQEYFRKFKKRKEQGLVAKVP
PKTALSLQAGLRTLHDIGPEIRRAISGDLTVEEEVDKGPKEPLSAASEDDIFRVKRSGGL
FGNHVNYYSQSDGRASFPQSFTTQRPLHISQKGSPCEGESPSHEKLMDSTTFTPSSYSSS
GSNANINNANNTGMAGVAPQGVGRFPSPSISTVDGHTGQPLTPILLPRSAWCFPPKRTSF
FDNLIRSDSSDSRLPIIRRGEGSTEETYDESYADERDFHEDDHSLSSDMLVYHDDTCKQL
TPMEEGDDMEARRGGGGWQSPRRVFFCPTSLGRRSSFHLECLRRQSRPDVSQKTAVPLHL
VHHQALAVAGLSPLIRRSHSPTLFSRLCSTPPASPTGQSGDASYQQVPSLRLEGSNSYEK
LNASLPSVNCGPWYTDSNGNSRVPSPSPASGMPTTNQRAARPVSLTVPSLLGHDSSSLSH
GSAGSLVEAVLISEGLGQFAQDPSFIEATKAELADACDMTIEEMEHAASNILNGNNAAGA
SDVAAPPAASRHSPNGNLLRFDRDRGAEDDGEAGGSRGSAVHGPSSVEERQELLAGVRGQ
DEEEEEEEEEEEGHHRSSVVMGGARQRTSGLLEDEDMECVTSL
NT seq
6972 nt
NT seq
+upstream
nt +downstream
nt
atgttgagaggacttttcacccggaaaccgaaacacgaaaggctgcaagaggaacccgag
gtgcgatttaaaggccggctggtgtcggagactgacctggggtatacgtacgtgcgaccc
ggaggctccgactactctccccctcaccctcttcctcgcccctctgcccccggcctgacc
aacgagcacccgggcgtcggcgaccgcgatgggagcggggtcaaccacggcgtagtggga
gtggtgggtctggccccggaacacatcgccacgccgggcgctgccctgagctggcaggcc
gccatcgacgccgcccgccaggccaagatgatgggcaacgcggcctcgggcggcgccgcg
gggctggcggcgggagggggcgggcccatctccacggccagctccacacagcgcaagagg
cagcactacagctccaagcccaagaagcagaccaccaccacggctacgcggccccctcga
gcgctgctgtgcctcacgctcaagaaccccatacgccgggcctgcatcagcatcgtggag
tggaaaccgttcgagatcatcatcctgatgaccattttcgctaactgcgtggccttagcc
gtctacatccccttccccgaggacgattccaacgccaccaactccaatttggagcgcgtg
gagtatctgttcctcatcatcttcaccgtggaggcgttcctgaaggtgatagcctacggc
ctgctcttccacccgaatgcctacctgaggaacggctggaatctgctcgacttcatcatc
gtagtcgtcgggttgttcagtgccatcctggagcaggccaccaagggcgacggcgccgct
cccatcggaggaaaagcggcgggcttcgacgtcaaggctctgcgggccttccgagtactc
cgacccctccgactggtctccggagtgccaagtttgcaggtggtgttgaattccatcatc
aaagccatggtccccctgctccacatcgccctgctggtcctcttcgtcatcatcatctac
gccatcatcggcctggagctcttcatgggcaagatgcacaagacctgctttcacgagcac
acaggcacgatagcggaggaaaaaccggcgccgtgcgcgcccgacatggcgtacggccga
cactgcaaccacaacgggaccgagtgcaaaatgggctgggagggccccaacgacggcatc
accaacttcgacaacttcgccttcgccatgttgaccgtgttccagtgcatcaccatggag
ggctggacggacgtgctgtactgggtgaacgacgcagtagggtacaggtggccgtgggtg
tattttgtcaccttaatcatcatcggatccttctttgtgcttaacttggttctgggggta
ttgagcggagagttttccaaggaaagggagaaggccaaggcacgaggcgacttccagaaa
ctccgagaaaaacagcagctggaggaggatctcaagggctacttagactggatcactcag
gctgaagacatcgacccggagaatgaggaggagggtctggacgacgacaaacccagaaac
ttgagcatgccggccagtgagaacgaatcggtgaacacagacaatgcacccggaggcgat
gtggagggagagacctgctgtacccggctcgcaaataggatctccaaatccaagttcagt
cgctactctcgcaggtggaaccggctgtgcaggcgcaagtgtcgggcggcggtcaagtcg
caggttttctattggctggtcatcttcctggttttcctaaacacgctgaccatcgcctcg
gaacatcaccaccagccgcaatggttaaccgacgtacaagacatcgccaacaaggtgtta
ctagcgctcttcactggtgagatgctgttgaagatgtacagtctgggccttcaggcgtac
ttcgtgtcgctcttcaaccgcttcgacagctttgtcgtctgcggcgggattctggagacc
atcctggtggaaactaagatcatgtcgccactcggcatctccgtgctgcgctgcgtacgc
ttgctgcgaatcttcaaaataaccagatactggaactcgctgtccaacttggtggcctct
ttgctgaactcggtccgctccatcgcctccctgctgctcctgctcttcctcttcatcatc
atcttctccctgctgggcatgcagctcttcggcggcaagtttaacttcgaggagacccgg
cgaagcaccttcgacaacttcccccagtcgctgctgaccgtcttccagatcttgaccgga
gaagactggaactcggtgatgtacgatggcatcatggcgtacggtgggccctccttcccc
ggcatgctggtctgcatctacttcatcatcctcttcatctgcgggaactatatcctactg
aacgtcttcttggccatcgctgtggacaatctggccgacgcggagagcctgacatctgcc
cagaaagaggaagaggaggagaaggagaggaagaaactggccaggctgggcactcctgac
aagcggcacaacaacgagaagcctccactggaggaggagaagagggagaagattgagctg
aagtccatcacctctgatggcgagaccaacactgccactaagatcaacatggacgattac
tgcggcgatgaaagcgaagagaagaatccgtaccccgctaatgattacataggcgacgac
gacgacgaggagccagacgtgccggtgggcccgaggccgcggccgctctccgacatccag
ctcaaggagaaggcggttcccatgcccaaggcccgcgccttcttcgtcttcagccacacc
aacaaattcagggtcctgtgccataaaatcgtcaaccacaacatcttcaccaacctcatc
ctcttcttcatcctgctcagcagcatcagtctggcggcggaggacccggtcaagaacgac
tccttcagaaacgagatcctgggctatgcggaccacgtcttcacggggcttttcaccatg
gagattattctcaaggtgcgcagactctacttttgctcagttttacattttaaaagtgta
ctagtttgtcattgtccactgcagatgacagcctacggagccttcctccacaaaggttct
ttctgcaggaactatttcaacattctggacctggtggtcgtgagcgtttccctcatctcc
tttgggatacagtccagcgcaatcaacgtggtgaagatcctgcgagttctccgagtgctt
cgacctctgcgggccatcaacagagccaagggtctaaagcacgtggtgcagtgcgtgttc
gtggccatcaggaccatcggcaacatcgtcatcgtcaccacgttgctccagttcatgttc
gcctgcatcggagtgcagctcttcaagggcaagttcttcacctgcacagacagctcaaaa
cagactaaggcggagtgcagaggctcctacatcaagtacaaggacggcgacgtggccaag
cccgaaagaggcctgaggctgtgggagaacagcgaatttaactttgacgacgtgctgcaa
ggcatgatggctctgtttgcggtgtccacctttgagggctggccggggctcctgtaccgg
gccatcgactctcacaccgaggacgtgggtcccatctacaactaccgtgtggtcatctcc
atcttcttcatcatctacatcatcatcatcgccttcttcatgatgaacatcttcgtcggc
ttcgtcatcgtcacgttccaggagcaaggcgagcaggagtataagaactgcgagctggac
aagaaccagcgtcagtgtgttgagtatgccctgaaggcccgccccctccgccgatacatc
cccaagaacccgtaccagtacaaggtgtggtatgtggtcaactccacctactttgagtac
ctgatgttcacgctcatcctcctcaacaccatctgtctggccatgcagcatcacggtcag
acgaagaacttcaacgacgccatgaatatcctcaacatgctcttcaccggcctcttcacg
gtggagatgatcctcaagttgatcgccttcaaacccaggggttactttagtgatccctgg
aatgtgtttgatttcctcatcgtaattggcagcataatcgacgtcattctcagcgagatc
aaccattattttgtcgatgcatggaacacatttgatgccttgatagttgtgggtagcttt
gttgacatagcgatcactgaggttcacggcctgcagaactctgaagagaacgcccggatc
tccatcaccttcttccggctcttccgtgtgatgcggctggtgaagctgctctctcgtggg
gaagggatccggacgctactgtggaccttcatcaagtccttccaggctcttccttacgtc
gccttgctcatcgtgatgctcttctttatatacgcggtcatcggcatgcagatgtttggc
aagatagcgttgcgggaccacacgcagatcaacaggaataataatttccagacgttcccc
caggcggtgttgctgctcttcagatgtgcgacgggcgaggcgtggcaggagatcatgctg
gcgtgcgcgcccaaccggccgtgcgagaaaggatccaccaacgagaacgtcaccgtccac
gaggactgcgggagccagtttgccatcatctactttgtcagcttctacatgctctgtgcc
tttctgatcatcaatctcttcgtggctgtcatcatggacaactttgactacctgacacgg
gattggtccatcctggggccgcatcatcttgacgagttcaagaggatctgggccgagtac
gacccggaagcgaaggggaggatcaagcacctggatgtggtgactctgctgcgaagaatc
cagcctccgctcggcttcggaaaactctgtcctcaccgggtcgcctgcaagcgactggta
tccatgaacatgcccctgaacagcgacggaaccgtcatgttcaatgccacgctgtttgca
ctggtcagaactgcactgaggatcaagacagaaggcaatctggagcaggccaatgaggaa
ctgagggccatcgtcaagaagatctggaagagaaccagcatgaaactcttggatcaagtc
gtgcctcctgctggcgacgacgaggtgacagtcggaaagttctacgccaccttcctcatt
caggagtatttccgcaagttcaagaagaggaaagaacaagggctggtggccaaggtgccg
cccaaaactgcactctctctgcaggcgggcctgcggacgttgcacgacatcggtccggag
atcaggagggccatctccggagacctgacggtggaggaggaggtggacaaaggcccgaag
gagccgttgtcggccgcatccgaggacgatatcttcagggtaaagcggtcaggcggcttg
ttcggcaaccacgtcaactactacagccagagcgacggccgcgcctccttcccgcagtcg
ttcaccacccagcgtcccttgcacatcagccagaagggctcgccgtgcgaaggcgagagc
ccgtcgcacgagaagctcatggactccaccacgttcacgccgtcctcgtactcgtcgtcg
ggctccaacgccaacatcaacaacgccaacaacaccggcatggcgggcgtggccccgcag
ggcgtgggccgcttcccgagcccgtccatcagcacggtggacgggcacacgggacagccg
ctgacgcccatcctgctgcccagatcggcctggtgcttccctccaaagaggacatctttc
tttgacaacctcattcgctccgactcgagcgacagccgcctgccgatcatccgcaggggc
gaagggtcgacggaggaaacgtacgacgagagctacgccgacgagagggacttccacgag
gacgaccactcgctctcctcagacatgctggtgtaccacgacgacacctgcaagcagctg
actcccatggaggaaggagacgacatggaggcgagaagaggaggcggcgggtggcagtct
cccagaagagtcttcttctgtcccacctctttagggcggagatcttctttccacttagag
tgtctgaggaggcagtcgaggccagacgtctcgcagaagacggccgtccccctgcacctc
gtccatcatcaggcactcgcggtggccgggctgagtcccttgataaggaggagccactcg
cccaccctcttcagccggctgtgctccacccctccggccagccccacagggcaaagcggc
gatgcctcgtatcagcaggtaccctcgctgaggttagagggctccaactcctatgaaaag
ctcaacgccagcttgccctcggtcaactgcgggccctggtataccgacagtaatgggaac
agtcgggtacccagccctagccccgcctccggcatgccgacgaccaatcagagagcggcg
cggccggtgtcgctcacggtgccctcgctattggggcacgactccagctcgctgtctcac
ggcagcgcgggaagtctggtagaggcggtgctaatatctgaaggcttgggtcagtttgcg
caggacccctccttcatcgaagccaccaaggccgagctggccgacgcctgcgacatgacc
atcgaggagatggagcacgccgccagcaacatcctcaacggcaacaacgccgccggcgcg
tcggacgtcgccgcgccacccgccgcctcccggcacagccccaacggcaacctcctgcgc
ttcgacagggaccgaggggcggaggacgacggggaggccggcgggagcagaggctccgcc
gtccacgggccgtcctccgtggaagagcggcaggagctgctggcgggggtacggggacag
gatgaggaagaggaagaggaggaggaggaggaggaaggacaccacagaagctcagtggtg
atgggaggagcgcggcagaggaccagcgggctgctggaggacgaggacatggagtgtgtg
accagtttgtag
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integrated database retrieval system
