Phycodurus eques (leafy seadragon): 133399116
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Entry
133399116 CDS
T09682
Symbol
traf6
Name
(RefSeq) TNF receptor-associated factor 6 isoform X1
KO
K03175
TNF receptor-associated factor 6 [EC:
2.3.2.27
]
Organism
pee
Phycodurus eques (leafy seadragon)
Pathway
pee04010
MAPK signaling pathway
pee04120
Ubiquitin mediated proteolysis
pee04140
Autophagy - animal
pee04144
Endocytosis
pee04517
IgSF CAM signaling
pee04620
Toll-like receptor signaling pathway
pee04621
NOD-like receptor signaling pathway
pee04622
RIG-I-like receptor signaling pathway
pee05132
Salmonella infection
pee05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
pee00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
133399116 (traf6)
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
133399116 (traf6)
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
133399116 (traf6)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
133399116 (traf6)
04140 Autophagy - animal
133399116 (traf6)
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
133399116 (traf6)
04621 NOD-like receptor signaling pathway
133399116 (traf6)
04622 RIG-I-like receptor signaling pathway
133399116 (traf6)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
133399116 (traf6)
09171 Infectious disease: bacterial
05132 Salmonella infection
133399116 (traf6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pee04131
]
133399116 (traf6)
04121 Ubiquitin system [BR:
pee04121
]
133399116 (traf6)
Enzymes [BR:
pee01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
133399116 (traf6)
Membrane trafficking [BR:
pee04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
133399116 (traf6)
Ubiquitin system [BR:
pee04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
133399116 (traf6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
zf-TRAF
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-RING_UBOX
zf-C3HC4_3
TRAF6_Z2
zf-C3HC4_4
zf-RING_5
zf-TRAF_2
U-box
TRAF3_RING
DM
RING_XB3-XBAT31
zf-RING_11
CEP104_ZnF
zf-rbx1
Motif
Other DBs
NCBI-GeneID:
133399116
NCBI-ProteinID:
XP_061526237
LinkDB
All DBs
Position
2:31032212..31050464
Genome browser
AA seq
554 aa
AA seq
DB search
MSGSDSHKGSLEEVSYEGAAGAELSSCALAMLERERESIHSPSESPGASTILPSTALVQG
YDVEFDPPLERKYECPICLMALRNAIQTPCGHRFCKSCIEKSIRDTGQRCPVDNEMLLED
QLFPDNFAKREILSLTVRCPNAGCTDKMELRHLENHLAQCPFATMPCPQCQQSVRKIYLE
EHKTIECRRRPMSCPDCVASFVYEEKELHEQQCPFATIMCQYCELVLIRDQMDSHCDTDC
PKAPIACTFSTFGCKERMQRHNLAQHMQEFTQMHMRYMAEFVRCLSLNGTTPKSLWALGP
SLSSEDQGAASASCRGIASCGPCQPSEEMQRIRDMDGRLVKQDHQLRELIILEDTRVGQL
AQLQKRVAVLEETVKELEAQQCHGIFIWRLRGFSAHLRNQEAGLPVVEHSPGFYTGRPGY
KLCLRLHLQTPNAPRCSNYISLFVHTMQGAFDGHLSWPFQGTIRLAILDQGPDAQHHMEV
METKPDLQAFKKPTIQRNPKGFGYVTFLHLHQLSQRAFVKDDTLLIRCEVTPRFDMFQRE
GPTVQPRGPEASRD
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atgtctggctctgacagtcataaggggagtttggaggaggttagttatgagggagctgct
ggtgccgagctgtccagttgtgccttggcgatgctggagagggaacgagaatccatacac
agcccctcagagagccctggtgcttccacaattctcccatctactgcccttgtgcagggc
tacgatgtggagtttgacccaccactcgagagaaaatatgaatgccctatctgcctcatg
gctctcaggaatgccattcaaacaccatgtgggcaccgtttctgcaagagctgcatcgag
aaatcaattcgggatacaggacagaggtgcccagtggacaatgaaatgctgttagaagac
caactgtttcctgataactttgccaaaagggagattctttcactcactgtccgctgtcca
aatgctggctgtactgacaaaatggagctccgacatttagagaatcatttggcacagtgt
ccatttgcaaccatgccctgcccccagtgccagcagtcagtgagaaaaatctacttggag
gaacacaaaaccatagagtgtcgaagaagaccgatgtcctgcccagattgtgttgcaagc
tttgtgtatgaggagaaggagcttcatgagcagcagtgtccctttgctaccatcatgtgc
cagtactgtgagctggttctcatcagagaccagatggactctcattgtgatacagattgc
cctaaagcccctattgcctgtacctttagcacttttggatgtaaggagaggatgcaacga
cacaacctggctcagcatatgcaggagtttacacagatgcacatgcgctacatggcagag
tttgtgcgctgccttagccttaacggcaccacaccaaagtcactttgggctcttggacct
tctctttcatctgaggatcaaggagcagcatctgcatcatgtagaggaattgcaagctgt
ggcccatgtcagccaagcgaagaaatgcagaggatacgggatatggatggacgattagta
aaacaggatcaccagctccgtgagcttatcatcttagaagatactcgggtagggcagctt
gcacagctccaaaaaagagtagctgttctagaggagactgtgaaggaattggaggcacaa
caatgtcatggtatcttcatctggcgtctcagaggtttctcagcccacctccggaaccaa
gaagccggcctgccggtggttgagcacagcccaggcttttacacgggccgaccgggctac
aaactgtgcctccgcttacacctgcagacccccaatgccccacgctgttccaactacatc
tccctctttgtccacaccatgcagggagcttttgatggacacctgagctggcctttccag
ggcacgatccgtctcgccattctagaccagggtcctgatgcgcaacatcacatggaggtg
atggagactaagccagaccttcaagccttcaagaaacctaccattcagcgtaaccccaaa
ggttttggttatgtgactttcctgcacttgcatcagctgagtcagcgagcttttgtcaag
gatgacaccctcctcatccgctgtgaggtaacaccacgttttgacatgttccaacgtgag
ggacccacagtgcagccaagaggccctgaggcctcccgggactaa
DBGET
integrated database retrieval system
