Phycodurus eques (leafy seadragon): 133407340
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Entry
133407340 CDS
T09682
Symbol
cacna1fb
Name
(RefSeq) calcium channel, voltage-dependent, L type, alpha 1F subunit isoform X1
KO
K04853
voltage-dependent calcium channel L type alpha-1F
Organism
pee
Phycodurus eques (leafy seadragon)
Pathway
pee04010
MAPK signaling pathway
pee04020
Calcium signaling pathway
pee04260
Cardiac muscle contraction
pee04261
Adrenergic signaling in cardiomyocytes
pee04270
Vascular smooth muscle contraction
pee04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
pee00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
133407340 (cacna1fb)
04020 Calcium signaling pathway
133407340 (cacna1fb)
09150 Organismal Systems
09152 Endocrine system
04912 GnRH signaling pathway
133407340 (cacna1fb)
09153 Circulatory system
04260 Cardiac muscle contraction
133407340 (cacna1fb)
04261 Adrenergic signaling in cardiomyocytes
133407340 (cacna1fb)
04270 Vascular smooth muscle contraction
133407340 (cacna1fb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pee04040
]
133407340 (cacna1fb)
Ion channels [BR:
pee04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
133407340 (cacna1fb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
CAC1F_C
Ca_chan_IQ
GPHH
PKD_channel
Motif
Other DBs
NCBI-GeneID:
133407340
NCBI-ProteinID:
XP_061541094
LinkDB
All DBs
Position
1:complement(25832312..25921195)
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AA seq
2064 aa
AA seq
DB search
MQHNHKSAARNGYANAVDGEDGGGEGEEGGEEDGGGDGGEERGGGDWDEDLEGEDGGVRM
TRTDTLHSTTSSTGTQRRRGQHAKKQVQGTNQVQRAPRALFCLKLNNPIRRAALSIVEWK
PFDIFILLAIFANCVALGVSKPFPEDDSNSTNHDLEQVEYVFLIIFTVETFLKILAYGLV
MHPSSYIRNGWNLLDFVIVIVGLFSVVLETMTHKSGEQASTHHMPGKPGGLDVKALRAFR
VLRPLRLVSGVPSLQIVLNSIMKAMVPLLHIALLVLFVIIIYAIIGLELFIGRMHRTCYY
IETDMYVEDDPVPCAFAGHGRQCTLNGSECRGRWDGPNGGITNFDNFFFAMLTVFQCITM
EGWTDVLYWMNDAIGFELPWVYFVSLVIFGSFFVLNLVLGVLSGEFSKEREKAKARGDFQ
KLREKQQMEEDLCGYMDWITQAEDMDELDEDRNSRPSLGDLSDKKKGKFGWFSHSNETHA
SLPASETASENTENIDEEHTNCCQACCARMMKISCCRTLRRWNRVCRRNCRTAVKSVTFY
WLVLLLVFLNTSLSASEHYNQPDWLTQVQDIANKVLLSLFTVEMLLKMYSLGLAHYFVAF
FNRFDCFVVCGGIMETILVELGIMPPLGISVLRCVRLLRIFKVTRHWTALSNLVASLLNS
MKSIASLLLLLFLFLIIFALLGMQLFGGKFNFDETQTKRSTFDAFPQALLTCFQILTGED
WNVVMYDGIMAYGGPVFPGMIVCIYFVILFICGNYILLNVFLAIAVDNLAGGDGDDKAKE
KKTEGAEEEEAEEEKQVKVDIDEDTEYEEEEELPEGEDDGGAQLKMADLAPPKEKILPIP
DGSAFFCLSKTNPIRVACHTLIHHHIFTNLILVFIILSSCSLAAEDPIRAHSFRNNVLGY
ADYAFTSIFTVEILFKMTVHGAFLHQGSFCRNWFNLLDLLVVSVSLVSFFLHSSAISVVK
ILRVLRVLRPLRAINRAKGLKHVVQCVFVAIRTIGNIMIVTTLLQFMFACIGVQLFKGKF
YRCTDEAKHTPEQCKGTFVVYKDGDVNHPMVRERIWHNSDFNFDNVLMGMMALFTVSTFE
GWPALLYKAIDANGENSGPIYNYRVEISIFFIVYIIIIAFFMMNIFVGFVIITFREQGEQ
EYKNCELDKNQRQCVEYALKAQPLKLYIPKNPVQYRFWSIINSTAFEYVMFVLILLNTVT
LAIQHYEQSKTFSHIMDILNMVFTGLFTVEMLLKLLALRLRHYFVDAWNSFDALIVVGSV
VDIVVTEFSSGEDSSRVSITFFRLFRVMRLVKLLSKGEGIRTLLWTFIKSLQALPYVALL
IAMIFFIYAVIGMQTFGKVAMQDHTQINRNNNFQTFPQAVLLLFRCATGEAWQEIMLASL
PGKRCDPESDYEPGEEFSCGSNFAIVYFISFFMLCAFLIINLFVAVIMDNFDYLTRDWSI
LGPHHLDEFKRIWSEYDPEAKGRIKHLDVVALLRRIQPPLGFGKLCPHRVACKRLVAMNM
PLNADGMVTFNATLFALVRTALKIKTEGNPDQENEELRGIIKKIWKRMKPKLLDEVIPPH
EEEEVTVGKFYATFLIQDYFRKFRKRKERGGLSVETDATNPSAVQLCKAGLKTLQDLGPE
MRLALNEDLEEEEEEEEEEEEESMREEEEMDTVGPHNDRRGSIVPVGPGGVMGDSGVVNG
GLIHRVGSLCKMSNGGDYDAHISRRDNLRSSVNHHHRRPSVRNGLLDNTHKRPSHYKYGR
RDLRYRHWRNGDMDISRETRYYTREDDTASITSTERYYPDDPLHDDDHAPYSHYGNGYSE
GRRATRRRILPATPTGRKPSFNIQCLRRQGSSDDLPMPGTYHPKSPPRRTCTQTYSSYDH
PPSSGHSTAVSSTSWANPCPRRGRLLYAPLILVEEEGSPSWRREVEGERGTGGGREDKLG
GAGRAGVSVTGAAPSPAWYGATGAPPPYRAYTTLRVPSQLGAPFGEKRGSADSLVEAVLI
SEGLGLYARDPKFVAFAKREIADACHMTVDEMESAASDLLGSASHDFLNTAGTEPAALYS
DEEPIRTGREEDELADEMSCVTSF
NT seq
6195 nt
NT seq
+upstream
nt +downstream
nt
atgcagcataaccacaaaagcgcggcacgtaacggctatgctaacgctgtggacggtgaa
gatggtggcggcgagggtgaggagggcggagaagaggacggaggaggagatgggggagag
gagagaggcggcggggactgggacgaggacctggaaggtgaggatgggggagtgaggatg
accaggacggacaccctccactccaccacgagctccactggaacgcaacgtaggagagga
caacacgctaagaaacaagtccagggcaccaatcaggtacaacgagctccccgagcgttg
ttctgcctgaagctcaacaaccccatcagacgtgcggcgctctccattgttgaatggaag
ccatttgacattttcatcctgctagccatctttgctaactgtgtcgctttgggtgtgtcc
aaaccatttcctgaggacgactccaattccaccaaccacgatctggaacaagtggagtat
gtcttcctcattatcttcactgtggaaaccttcctgaagatcctggcttacggtctggtc
atgcatccaagttcttacatccgaaacggctggaaccttctggactttgtcattgtcatc
gtcggtttgttcagcgtcgtcctggagaccatgacgcacaagtcaggcgagcaggcgagc
acacaccacatgccgggcaaacctggaggtctggacgtcaaagctttgcgcgccttccgg
gtcctgcggcccctcaggctggtttcaggagttcccagtctgcagatcgtgctgaactcc
atcatgaaggccatggttcccctgctccacatcgctctgctggtcctcttcgtcatcatc
atctacgccatcatcggcttggagctcttcatcggacgcatgcacagaacctgctactat
atagaaactgacatgtatgtggaggacgacccggtgccgtgcgccttcgcgggtcacggc
cgccagtgcacgttgaacggctcagaatgtcgtgggcgatgggatgggcccaacggaggc
attaccaattttgacaactttttcttcgccatgttaacggtgttccaatgtatcaccatg
gagggctggaccgacgtcctgtactggatgaacgacgccatcggcttcgagttgccatgg
gtctactttgtcagtctggtcatctttggctccttcttcgttctcaacctggttcttggc
gtcctcagcggagagttcagcaaggaaagggagaaggcgaaagctcgcggagacttccag
aagctccgcgagaagcagcaaatggaggaggacctgtgtggatacatggactggatcaca
caggctgaggacatggacgagctggacgaggatagaaactcgcgtccatctctgggtgat
ctgtcagataagaagaaagggaagtttggatggttcagtcactccaatgaaacacacgca
agtcttcctgccagcgaaacggcgtctgagaacacggagaacatcgatgaagaacacacc
aactgctgccaggcctgctgtgctcgaatgatgaagatcagctgctgtcgtactctgcga
cgctggaaccgagtgtgtcgcaggaactgtcgcactgcggtcaaatctgtgacattctat
tggctggtcctgctgcttgtcttcctcaacacgtccctcagcgcctccgagcactacaac
caacctgattggctgacgcaggtgcaggatatcgccaacaaggtgctgctgtcactgttc
acggtggagatgcttctgaagatgtacagcctgggcctggctcattactttgtggcgttt
ttcaaccgctttgactgcttcgtggtgtgcggcggcatcatggagaccatcctggtggaa
ctgggcatcatgccaccgctgggaatctccgtgctacgttgcgtccggctgctgcgaatc
ttcaaggtcacgcgccattggacggcactgtccaacctggtggcgtctctgctcaactcc
atgaagtccatcgcctcgctactgttgctcctcttcctcttcctcatcattttcgccctg
ttgggaatgcaactctttggtggcaagttcaacttcgacgagacacagaccaagcgcagc
accttcgacgctttcccacaggcgctgctcacctgcttccagatcctgacaggcgaggac
tggaacgtggtaatgtacgatggtatcatggcatacggtggccccgtctttccggggatg
atcgtctgcatctactttgtcatcctgtttatttgcggaaactacatcctgctcaacgtc
ttcttggccattgctgtggacaatttggccggaggtgacggagacgacaaagcgaaagag
aagaagacggagggagcggaggaggaagaggcagaggaggagaagcaagtgaaggtggac
attgacgaggacacagagtacgaggaagaggaggagcttccggaaggcgaagatgacggc
ggcgcgcagctaaagatggctgacttggccccgcccaaagaaaagattcttcccatccca
gacgggagtgcgttcttctgcctcagcaagacaaaccccatccgagtggcgtgccacact
ctgatccaccaccacatcttcaccaacctcatcctggtcttcatcatcctcagctcgtgc
tcattggctgctgaagatcccatcagagcgcactcctttcggaacaacgttctgggttat
gccgactatgccttcacctccatcttcactgttgaaatcctgttcaagatgacggtccac
ggagcgttcctgcaccagggctctttctgcaggaactggttcaacttgttagatctcctc
gtagtcagcgtgtcactcgtctccttcttcctgcattccagtgccatctcggtggtaaag
atcctgagggtcctccgtgtgctcagacctctgagggccataaacagagccaaaggcctc
aagcacgtggtccaatgtgtgtttgtggccatcaggaccatcggcaacatcatgatcgtc
acaacattgctccagttcatgtttgcgtgtatcggggtgcaactcttcaagggtaaattc
tatcgttgtaccgatgaggccaaacacacacctgaacagtgcaaagggacatttgtggtg
tacaaagatggagacgtaaaccatccgatggtgcgagaaagaatttggcacaacagtgac
ttcaattttgacaatgtgctcatgggaatgatggcactcttcaccgtgtctacttttgag
ggctggcccgccctgctatacaaggccatcgacgccaacggggagaactcgggtcccatc
tacaactaccgtgtggagatctccatcttcttcatcgtctacatcatcatcatcgccttc
ttcatgatgaacatcttcgtgggtttcgtcatcatcacgttcagggagcagggagagcag
gagtataagaattgtgaactggacaagaaccagcgtcaatgcgtcgagtacgctctaaag
gctcagcccctaaagctctacatccccaagaacccagttcagtacaggttctggtccatc
atcaactccacagcctttgagtacgtcatgtttgtgctcatcctgctcaacactgtcacg
ctcgccatccagcactacgagcagtccaagaccttcagccacatcatggacatcctcaat
atggtcttcactggactcttcactgtggagatgctgctcaaactgttagccctcagactc
aggcattactttgtggatgcgtggaattcctttgatgctctcatcgtggttggcagtgtg
gtagacatcgtagtgacggagttcagcagtggagaggacagctctcgagtgtccattact
ttcttccgcctcttccgagtgatgcgattggtcaaactgctgagcaaaggggagggcatc
cgaaccctgctatggaccttcatcaagtcgctgcaggcactcccgtacgtcgccctgctc
atcgccatgatctttttcatctacgcagtcatcggcatgcagacgtttgggaaggtcgcc
atgcaggatcacacgcagatcaacaggaacaacaacttccagacttttcctcaggccgtc
ctcctcctcttcaggtgtgcgacaggcgaggcatggcaggagatcatgctggccagtctt
cccgggaaacgctgcgatcctgagtccgactacgagccaggagaagagttcagctgcggg
agcaactttgccatcgtttacttcatcagctttttcatgttgtgtgccttcctgatcatc
aacttatttgtggcagtcatcatggacaactttgactacctaacccgcgactggtcgatc
ctgggtccacatcacctagatgagttcaagaggatctggtcagaatatgatccagaggcc
aagggtcgcattaaacatttggatgttgtggctctacttcgaaggatacaacctcctctt
ggctttggaaaactgtgtcctcacagagtagcgtgtaagcgtctggtggctatgaacatg
cctctgaatgcagacggcatggtgacattcaacgccaccctctttgcgctggtccgcacg
gcactgaagatcaagaccgaaggcaacccggatcaggagaacgaggagctaagggggatc
atcaagaagatctggaagagaatgaaaccaaaacttctggatgaagtcattccaccacat
gaagaggaggaagtgacagttgggaagttctatgccactttcctgatccaagattacttc
cgcaagttccggaagaggaaggagagagggggtctgagtgtggagactgacgccaccaac
ccgtcagccgtacagttatgtaaagcgggtctcaagactctgcaggatctcggtccagag
atgcgtctggccctcaatgaagacctggaggaggaagaggaggaggaagaagaagaggag
gaggagtccatgagggaagaggaagagatggacacagtaggaccacacaatgaccggcgg
ggatctattgtgcccgtcggtccagggggagtcatgggtgacagcggtgtggtaaatggt
ggtttgatccatcgggtcggttctctctgcaaaatgtctaatggcggcgattacgatgct
cacatttcacggcgagacaatctgaggtcatctgttaatcatcatcaccgccgaccctca
gtcaggaatgggcttctagacaacacccacaagaggccatcgcattacaaatatggaagg
agggacttgaggtacaggcactggcggaatggcgacatggacatatccagagagacacgt
tactacacaagagaagacgacacagccagcatcacttccacagaaagatattaccctgat
gatcctctgcacgatgatgaccacgccccctacagtcactatggaaacggctacagcgag
ggtagaagagcaacacggaggcgtattctcccggccacgcccacaggtcgaaagccctcg
ttcaacattcagtgtctgagacgtcagggcagcagtgacgacttacccatgccgggaacg
taccaccccaagtctcctccgcgccgcacctgcactcagacatacagcagttacgaccat
cctccgtcatccggtcactctactgcggtttcctccacgtcctgggccaatccttgtcct
cgccgcggtcgcctcctgtacgctcctctcatcctggtggaggaggagggaagcccatcg
tggcggcgagaagtagaaggagaacgaggaacaggaggaggccgggaggacaagctgggg
ggagcaggaagagcaggtgtcagtgtgacgggagcggcgccgagtcccgcctggtacggc
gctacgggagccccacctccttacagagcgtacaccactctcagagttccttctcagctc
ggtgctccgtttggcgagaaacgtggctcggccgacagtctggtggaggcggttctcatc
tctgaaggtctcggcctttacgcacgtgatcccaaatttgtggcattcgcaaagcgggag
atcgcggacgcatgtcacatgaccgtggacgagatggaatcagccgccagcgacctgctg
gggtccgcgagccacgacttcctcaacaccgccggcacagaacccgctgcactctacagc
gatgaggagccgatcagaacgggccgagaggaggacgagctcgctgacgaaatgagctgc
gtgacatcattttga
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integrated database retrieval system
