Candidatus Pelagibacter giovannonii: E5R92_05125
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Entry
E5R92_05125 CDS
T06537
Symbol
mdh
Name
(GenBank) malate dehydrogenase
KO
K00024
malate dehydrogenase [EC:
1.1.1.37
]
Organism
peg
Candidatus Pelagibacter giovannonii
Pathway
peg00020
Citrate cycle (TCA cycle)
peg00270
Cysteine and methionine metabolism
peg00620
Pyruvate metabolism
peg00630
Glyoxylate and dicarboxylate metabolism
peg00680
Methane metabolism
peg00710
Carbon fixation by Calvin cycle
peg00720
Other carbon fixation pathways
peg01100
Metabolic pathways
peg01110
Biosynthesis of secondary metabolites
peg01120
Microbial metabolism in diverse environments
peg01200
Carbon metabolism
Module
peg_M00009
Citrate cycle (TCA cycle, Krebs cycle)
peg_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
peg_M00012
Glyoxylate cycle
peg_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
peg00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
E5R92_05125 (mdh)
00620 Pyruvate metabolism
E5R92_05125 (mdh)
00630 Glyoxylate and dicarboxylate metabolism
E5R92_05125 (mdh)
09102 Energy metabolism
00710 Carbon fixation by Calvin cycle
E5R92_05125 (mdh)
00720 Other carbon fixation pathways
E5R92_05125 (mdh)
00680 Methane metabolism
E5R92_05125 (mdh)
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
E5R92_05125 (mdh)
Enzymes [BR:
peg01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.37 malate dehydrogenase
E5R92_05125 (mdh)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldh_1_N
Ldh_1_C
UDPG_MGDP_dh_N
Glyco_hydro_4
F420_oxidored
SHOCT-like_DUF2089-C
ArgZ-like_C_1st
Motif
Other DBs
NCBI-ProteinID:
QIZ21161
UniProt:
A0A6H1Q2Z3
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All DBs
Position
930905..931867
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AA seq
320 aa
AA seq
DB search
MKKISLIGAGQIGGTLAHLIGTKEVADEVVLFDVASGIAKGKALDIAQSSSVDGFNVKFS
GTDNYEDIKDSDVIIITAGVPRKPGMSRDDLLGINLKIIKQVAEGIKKNAPNAFVICITN
PLDVMVMAFQKFSGLLANKVVGMAGILDSSRFKLFLSLELNVPVKEIEAMVMGGHGDTMV
PLPRFTKVSGKPLLDLVKEGKISPERLEEINQRTRDGGAEIVKYLEKGSAFYAPAASGVQ
MAEAYLKDEKKLLPCAVHLNGEYGVSDVYAGVPVIIGKDGVEKIEQIDLDEKEKKEFMHS
IDAVKALWEAASKIDPDLSK
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaatatctttaataggagcaggtcaaattgggggcactcttgctcacttaata
ggaaccaaagaagtagctgatgaagtggtactatttgatgttgcaagtggcatagctaaa
ggaaaagctctagacatagctcaatcttcctcagttgatggttttaatgtgaaattttca
ggtacagacaattatgaagatataaaagattcagatgtaataataatcactgcaggagtt
ccaagaaaaccaggaatgagcagagatgatttattgggtattaatctaaaaattattaaa
caagtagcagaaggcattaaaaaaaatgcacctaatgcatttgttatatgtatcacaaat
ccattagatgttatggtgatggcctttcaaaaattttctgggttactagcaaataaagta
gttggaatggcaggaattttagacagctcaagatttaaattatttttatctctagagcta
aacgttcctgtaaaagaaattgaggcaatggttatgggaggtcatggagacacaatggtt
cccctaccaagattcacaaaagtttcaggtaaaccattactagacttagttaaagaagga
aaaatatctccagaaagattagaggaaattaaccaaagaactagagatggtggagctgag
attgttaaatatttagaaaaaggttctgcattttatgcaccagcagcttcaggagtacaa
atggcagaagcatacttaaaagatgaaaaaaaattacttccatgtgcagttcatttaaat
ggagaatatggtgttagcgatgtttatgcaggtgtaccggtaataattggtaaagatggt
gttgaaaaaatagaacaaatagacttggatgaaaaagaaaaaaaagaatttatgcactcg
atagatgctgtgaaagcattatgggaagctgcatcaaaaatagacccagatttgtctaaa
taa
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