Candidatus Pelagibacter giovannonii: E5R92_05375
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Entry
E5R92_05375 CDS
T06537
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
peg
Candidatus Pelagibacter giovannonii
Pathway
peg01501
beta-Lactam resistance
peg01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
peg00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
E5R92_05375
01503 Cationic antimicrobial peptide (CAMP) resistance
E5R92_05375
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
peg03036
]
E5R92_05375
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
peg02000
]
E5R92_05375
01504 Antimicrobial resistance genes [BR:
peg01504
]
E5R92_05375
Chromosome and associated proteins [BR:
peg03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
E5R92_05375
Transporters [BR:
peg02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
E5R92_05375
Antimicrobial resistance genes [BR:
peg01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
E5R92_05375
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
DUF5962
Motif
Other DBs
NCBI-ProteinID:
QIZ21211
UniProt:
A0A6H1Q344
LinkDB
All DBs
Position
complement(983518..984435)
Genome browser
AA seq
305 aa
AA seq
DB search
MKRSTKIGTAILVFFLIITIVIVGRTMIGNHFKKKFSKRPPPGIIVTEVKAKDFSQKVST
YGTAIPFRTKSYKIEKYEIVDPIEFNKRLKKGDLITKLKTRNLIAAFDGIVTKRDFSNDI
KVSESSLLIQLEDTSIIYVDVDIPELYASFIKENLNVDVKFSGNNDKIYTGIIDSTSGRI
DIEKRSLATRIKLQNDNFDILPGSLLEITIKYNEKNSLGIPDTSLMMEGDKTYVYKVSEK
NITNKAEVVIGIRDNGFIEIVSGLSQGNKIVAEGLKKVRPRLEIKPIKKGEKKAESNWEK
KDNKN
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagatctacaaaaattggaactgcaatccttgtcttctttttgattattacaata
gtaatagttggaagaacaatgataggaaatcattttaagaaaaaatttagcaaaagaccc
cctccagggataatagtaacagaagtcaaagctaaagatttctctcaaaaagtttcaact
tatggaactgcaatcccatttagaactaaatcatataaaattgagaaatatgaaatagtt
gatccaatagaatttaataaaagattaaaaaaaggtgatttaataacaaaattaaagact
agaaatctaatagcagcctttgatggaatagtgacaaaaagagacttctcaaatgatatt
aaagtatctgaaagctctctcttaattcagctagaagatacttcaataatttatgtagat
gttgatatccctgagctttacgcaagtttcatcaaagaaaatttgaatgttgatgtgaaa
ttttctggtaataatgataaaatttatactggaattatagactctacatcaggaagaatt
gatattgaaaaaagatctttagctacaagaataaagttgcagaatgataattttgatatt
ttaccaggatctcttttagagatcacaattaagtataatgaaaagaattcactaggtata
cctgacactagcttgatgatggagggtgataaaacctacgtttataaagtttcagaaaaa
aatattactaacaaagctgaagttgtgattggaataagagataatggatttattgaaata
gtttcagggttatcacaaggaaataaaattgttgctgaagggcttaaaaaagtgagacca
agacttgaaataaaaccaattaaaaaaggtgaaaaaaaagctgaatccaattgggaaaaa
aaagacaacaaaaattaa
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