Planctopirus ephydatiae: Spb1_13970
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Entry
Spb1_13970 CDS
T06220
Symbol
pdg
Name
(GenBank) Ultraviolet N-glycosylase/AP lyase
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
peh
Planctopirus ephydatiae
Pathway
peh03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
peh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Spb1_13970 (pdg)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
peh03400
]
Spb1_13970 (pdg)
Enzymes [BR:
peh01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
Spb1_13970 (pdg)
DNA repair and recombination proteins [BR:
peh03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Spb1_13970 (pdg)
Prokaryotic type
Spb1_13970 (pdg)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
RecR_HhH
EndIII_4Fe-2S
HHH_5
HHH_8
AceK_regulatory
Motif
Other DBs
NCBI-ProteinID:
QDV29490
UniProt:
A0A518GLI5
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All DBs
Position
complement(1710764..1711624)
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AA seq
286 aa
AA seq
DB search
MAKGRESKQALIDRTGRILAQLERTYPDVECALEHTSPYELLAATILSAQCTDERVNMVT
PGLFKVYPTPAHLAKARQEDVEAIVKSTGFFRNKAANLIGMAQAVVEKHQGEIPQTLEEL
VALPGVGRKTANVLLGTFHGVPSGVVVDTHVQRISRLLGLAKGNNAETIERELMAIVPQH
EWIMLSHRLIHHGRQICIARRPQCTRCPLLADCRRVGLPELEMPTSVLDDSAEPQETRPL
KKPTRVKKTMTKGTPLKGTRKATATTAPLAPKSKKNIAKPQNRNGR
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atggccaaaggtcgggaatcgaagcaagctctcatcgacagaaccggacggattctggct
cagcttgaacgcacgtatccggatgttgaatgtgctctcgaacatacctcgccgtatgaa
ctgctggcagccacaattctcagtgcgcagtgtaccgatgagcgtgtgaatatggtcacg
cctgggttattcaaggtgtatccaacgcccgctcacctggccaaagcccggcaggaagat
gtcgaagccattgtgaaatcaaccggtttcttccgcaataaagcggccaatctgattggt
atggcccaggccgtcgtggaaaagcatcagggagagattccacaaacactggaagagctg
gtcgcgctgccgggagtgggaagaaaaaccgccaatgttctcctcgggacatttcacggc
gtaccaagtggtgtggtcgtcgatactcatgtgcagcgaatcagtcgtttgttagggcta
gccaaaggcaataatgccgaaacgattgaacgcgaactgatggccattgttccacaacac
gagtggatcatgctctcccaccgcctgattcatcatggtcgacagatctgcattgccagg
cggccgcaatgcacacgttgcccattactggcagactgtcgtcgtgtgggtttgcctgaa
ctggaaatgccgacttccgtgctcgacgattctgcagaacctcaggaaactcgccccttg
aaaaagcccactcgagtcaagaaaacgatgaccaaaggcacacctttgaaaggcactcgc
aaggcgaccgcgaccaccgcaccattggctccaaagagcaagaaaaatatcgcaaaaccc
cagaatcgtaacgggcgctga
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