Planctopirus ephydatiae: Spb1_24620
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Entry
Spb1_24620 CDS
T06220
Symbol
cefD
Name
(GenBank) Isopenicillin N epimerase
KO
K04127
isopenicillin-N epimerase [EC:
5.1.1.17
]
Organism
peh
Planctopirus ephydatiae
Pathway
peh01100
Metabolic pathways
peh01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
peh00001
]
09100 Metabolism
09110 Biosynthesis of other secondary metabolites
00311 Penicillin and cephalosporin biosynthesis
Spb1_24620 (cefD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01008 Polyketide biosynthesis proteins [BR:
peh01008
]
Spb1_24620 (cefD)
Enzymes [BR:
peh01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.17 isopenicillin-N epimerase
Spb1_24620 (cefD)
Polyketide biosynthesis proteins [BR:
peh01008
]
Nonribosomal peptide tailoring proteins
Others
Spb1_24620 (cefD)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aminotran_5
Aminotran_1_2
DegT_DnrJ_EryC1
Cys_Met_Meta_PP
Hint_2
Motif
Other DBs
NCBI-ProteinID:
QDV30528
UniProt:
A0A518GPI2
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All DBs
Position
complement(3056190..3057389)
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AA seq
399 aa
AA seq
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MTDLLQLNDATHIKRNFWKIADGVTYLNHGSFGPTPLPVQEARYQWSQRLAANPMNGFVR
ELDHEVELAKSALASFLKCSPNDLLFIENATTAMNVVAASFELRPGDEVLFNDHEYGAVR
RIWERACTVAGAKLVTANLRPFHDPSDVIEPLLDAVTPRTRLVILSHVTSATATIFPIRE
LMAEFKQREIPVVIDGPHAIAMQDFSLGELGAAFYCASLHKWLCAPLGTGFLYVAPEWQS
KVRAPMLSWGRPVAGHAATWQDELRWQGTRDPDHYLAVPTAIQFMESFGLDHFRNRGFAL
ACEARAMLEDIFGTKAIAPADRAWSGTMVAVPLPPSQLPLPKADSDPLQVGLWETARIEA
PVMFWNGTRHLRISCHLYNDRQDLRLLEETLKKLHGRCW
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atgaccgatctgctgcaactcaacgatgccacccacatcaaaaggaacttctggaagatt
gccgatggtgtgacttacctcaatcacggttcctttggcccgactcctcttcccgtccag
gaggcccggtatcaatggtcgcagcgacttgccgccaatcctatgaatggcttcgtccgc
gaactggatcatgaagtcgagctggcaaaatccgctctcgccagtttcctgaaatgttct
cccaatgacctgctgttcatcgaaaacgccaccaccgccatgaatgtcgttgcagcctcg
ttcgagctgaggcccggcgacgaagtcctgttcaacgaccatgaatatggagccgtccgc
cgcatctgggaacgagcctgcacagtagccggtgccaaacttgtgacggctaacctaagg
ccatttcacgatccctcagatgtcatcgagcccctgctcgacgccgtcacaccgcgcaca
cggctcgttattttaagtcatgtgacctccgcaacggcgacgatctttcccattcgcgaa
ctcatggccgaattcaagcagcgggagattcccgtcgtcattgatggcccgcatgccatt
gccatgcaggatttttcactgggagaactgggggccgccttttattgtgcgagcctgcac
aaatggctctgtgctcccttaggaaccggcttcctttacgtcgcaccggaatggcagtcg
aaagtccgtgctcccatgctgagctggggccgccctgtcgcgggacatgccgctacctgg
caggatgaacttcgctggcaaggcacacgcgatccagaccactacctcgcggtaccgacc
gcgatccagttcatggaatcgttcggcctcgatcactttcgcaatcggggtttcgccctt
gcatgtgaagcccgagcgatgctggaagacatcttcggcaccaaagcgatcgctccagcg
gatagggcctggagcggcacgatggtcgctgtccccttgcctcccagccagttgccactc
cccaaggccgattccgacccgcttcaggttggcctttgggaaacagcccgtattgaggca
ccggttatgttctggaacggcacccgccacctccgcatctcctgccatctctacaacgac
cgccaggatctccgcttgttagaagaaaccctcaaaaaactccacggccgctgctggtag
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